Prosopis cineraria: 129285678
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Entry
129285678 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129285678
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129285678
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
Pre-60S particles
Helicases
129285678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
129285678
NCBI-ProteinID:
XP_054777426
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MGEASENTSKETAREHEVTEDQTFEELGLDARLVHALLKKGVEKLTPIQQVAIPLILEGK
DVVARAKTGSGKTFAYLLPLLQKLFTNNVQRKKLSPNAFILVPTRELCQQVYAEVSSLIE
LCRVQLKAVQLTSNMKASDLRAAMTGPPDVLISTPACIAKCLSTDILKSTSINSSLETLV
LDEADLLLSYGYENDIKAFSAHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPELG
NQKDEIIPKNVQQFWISCPTSDKLLHILALLKLELVQKKVLIFTNSIDMSFRLKLFLEKF
GIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDSHIKEKDEATKQSNGELWRSKKHV
KQKLDSEFGVVRGIDFKNVYTVMNLEMPQSVAGYVHRIGRTGRAYNSGSSISLVSPDEME
TLDEIKSFVGDDESNGSSTIAEFPLLTKNAVESLRYRAEDVAKSVTKIAVRESRAQDLRN
EILNSEKLKAHFESNPRDLDLLKHDKVLSKNAPPAHLRDVPDYLVDKTTKEAREMVKLAR
EAMGNNNRSRGSRRKKFRKGGDPLKAISAKVSKRPHKGDGHKRRKKNEV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagcaagtgaaaatacctctaaagaaactgcacgtgaacatgaagttacagaa
gaccagactttcgaagaactaggattggatgcacgcctagttcatgccttactcaaaaag
ggagtggagaaactcactccaattcaacaggtggccattccactcatattggaaggtaag
gatgtggttgctcgggcaaagacaggttctggcaagacatttgcataccttcttccattg
cttcaaaaattgtttactaataatgttcaaagaaagaagctatcacccaatgcattcatt
cttgtgccaactcgagaactatgtcaacaggtatacgcagaggtttcctcccttatagaa
ttatgcagagttcagttgaaagctgtgcaattgacaagcaatatgaaggcttctgatctg
cgggcagcaatgactggaccacctgatgtattgatttccactcctgcttgcattgctaaa
tgcttgtccactgacatacttaaatcaacatccattaacagttcccttgaaactctagtt
cttgatgaggcagatcttctgttgtcatacggctatgaaaatgatataaaagccttttca
gctcatgtgcctagaagttgccaatgtcttctaatgtccgcaacatcaagtgctgatgtt
gacaagctaaagaagttgattctgcacaatccctttattttgactttgcctgaactagga
aatcagaaggatgagattatccctaaaaatgttcaacaattttggatctcatgccctacc
agtgataagttgcttcacatccttgccttgttgaagttggagctggtccaaaagaaagtt
ctaatatttaccaatagcatagacatgagtttcagattgaaactattcttggaaaagttt
gggatcaagtctgctgttttaaacgctgagttgccacagaattctcgtcttcatattctt
gaggaattcaatgctggcctctttgattatcttattgcaactgatgacagccacataaag
gagaaggatgaagcaactaagcaaagtaatggtgagttgtggcggtccaaaaaacatgtc
aagcaaaaactagattctgaatttggagttgtgaggggaattgactttaaaaatgtgtac
acggttatgaacttagaaatgcctcaaagtgttgcaggatatgtccatcgaataggacgt
actggaagagcatacaattcaggctcttctatatctttggtttctcctgatgagatggaa
actttggatgaaataaaatcttttgttggggatgatgaaagcaatggttcaagcacaatt
gctgaatttccattgctcactaagaatgctgtggaatctttacgttatcgggctgaggat
gttgcaaagagtgtgacaaaaattgcggttcgtgaatcacgagcccaggatttgaggaat
gaaattctcaactctgaaaaactgaaggcacactttgaatctaatccaagggacctagat
ttattgaagcatgacaaagttttgagcaaaaatgccccgccggcacacctacgtgatgtg
ccagactacctagttgacaaaacaacgaaagaggcaagggaaatggtcaagcttgcaagg
gaagcaatgggaaataataatcgatcccggggatccaggaggaagaagttcagaaaaggt
ggagaccctctcaaggctatatctgccaaggtatcaaaaagaccacacaaaggagatgga
cataaacgcaggaagaaaaatgaagtttga
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