KEGG   Prosopis cineraria: 129285868
Entry
129285868         CDS       T09047                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
pcin  Prosopis cineraria
Pathway
pcin03420  Nucleotide excision repair
pcin04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129285868
  09124 Replication and repair
   03420 Nucleotide excision repair
    129285868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcin04121]
    129285868
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129285868
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcin04147]
    129285868
Ubiquitin system [BR:pcin04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     129285868
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129285868
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129285868
Exosome [BR:pcin04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129285868
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 129285868
NCBI-ProteinID: XP_054777786
LinkDB
Position
Unknown
AA seq 817 aa
MSLPTKRSTTDNNAASAATAASSSAARSPPMKKTKNGLQHHPQDCNLNPSDDIVFDPKSM
ALDDDLKADDPTSLPNAGAVIAANLSRKKATPPQPPRTKKLAIKLHKAKPTLPPDFEEVT
WAKLKSAICAIFLKQPNSCDLENLYQAVNDLCLHKMGGNLYQRIENECEAHISAAIQSLV
GQSPDLGVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFCKHL
SLSPEVLHKTVTGLLRMIEHERLGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEF
YAAEAMKYMQQSDVPDYLKHVETRLHEEQERCLKYLDSSTRRPLIATAEKQLLECHIPAI
LDKGFMLLMDGNRIEDHQRMYSLFSRVNALESLRQALSSYIRRTGQGIVMDEEKDKDMVS
SLLEFKASLDKIWEESFLKNEAFSNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKG
TSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTEC
GSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVR
LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLF
NDAEKFSFQDIRDATGIEDRELRRTLQSLACGKVRVLQKLPKGRDVEDDDLFIFNEGFTA
PLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQ
LKFPIKPVDLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgtctcttcccaccaaacgctccaccactgacaacaacgccgcctccgccgccactgcc
gcgagcagctccgccgcccgctcacctcctatgaagaagaccaagaacggccttcaacac
caccctcaggactgtaatcttaacccttctgacgacattgttttcgaccccaaatccatg
gctctcgacgacgatctcaaggccgatgatcccacttcactcccgaatgcgggtgccgtc
atcgccgccaatttgtcccgcaaaaaagccacccctcctcagccccctcggactaagaag
ttagctatcaagctgcacaaagctaaaccaacattgcccccggattttgaggaggttaca
tgggcaaaattgaagtctgctatttgtgctatattcttgaagcagcctaattcttgtgac
ttagagaacctttatcaggctgtgaatgatctttgcctgcataaaatggggggaaatctt
tatcaacggattgaaaatgagtgtgaagcacacatctctgcggcaatacagtctttggtt
ggccaaagcccagatttgggtgtttttctttctcttgttgagagatgttggcaggacctt
tgtgatcaaatgttaatgatacgtggtatagccttatatctggataggacgtatgttaaa
caaacggcaaatgtacggtcattatgggacatgggcttgcaacttttctgcaaacatcta
tcactatctcctgaagtattgcacaaaactgttactggccttcttcgaatgattgagcat
gagagattaggtgaagcagtggatcggactctcctaaaccatcttctgaaaatgtttact
gctctgggaatttatgcagaaagctttgagaagccatttcttgagtgtacatcagagttt
tacgctgctgaagccatgaaatacatgcagcaatcagatgttccagattatttgaagcat
gtggagacgagattgcacgaagaacaggaaagatgtttgaaatatttggattcaagtact
aggagacctttgatagccacagcagaaaagcaacttcttgaatgtcatatacctgccata
cttgataagggtttcatgctgcttatggatggaaatcgtattgaagaccatcagagaatg
tattcactattttcaagggtcaatgcccttgagtcgctaaggcaggccttgagctcatac
atcaggagaaccgggcaaggaattgttatggacgaggagaaagataaagatatggtttca
tcccttctggagttcaaggcttctcttgacaaaatatgggaagaaagctttctcaagaac
gaagcattctctaacactatcaaggatgcttttgagcatcttatcaatttacgtcagaac
cgacctgcagagttgattgccaagtttttggatgagaagcttcgtgcaggtaataagggt
acttctgaagaggaattggagggtacactagataaagtcctagtattattcaggttcatc
cagggcaaggatgtgtttgaagcattctataagaaagatcttgctaaaagattgcttttg
ggaaagagtgcttctattgatgcagagaaatctatgatatcaaagttgaagactgagtgt
ggcagccagttcacaaacaaattggaaggaatgttcaaggacattgaattatcaaaagaa
ataaacgagtccttcaaacagtcatcccaggctaggacgaaactcccatcagggattgaa
atgagtgttcatgtcttaacaacagggtactggccaacgtatccccccatggatgtgaga
ctccctcatgaattgaatgtttaccaggatatattcaaagagttctatctaagtaaatac
agtggaaggcgtctgatgtggcaaaattctttaggtcactgtgtcttaaaggcagagttt
cctaaaggtaaaaaggagttggctgtgtccctctttcagactgttgttctgatgctattc
aatgacgctgagaaatttagctttcaagacattagagatgctactggtatcgaagacaga
gaattgagaaggactctgcaatcacttgcatgtggaaaagttcgtgttctgcagaagttg
cccaaaggaagagatgtggaggacgatgacttatttattttcaatgaggggtttactgct
cctctctaccgcataaaggtaaacgcaattcagatgaaggagacagtggaggagaataca
agtaccactgagagagttttccaagaccgtcagtatcaggttgatgctgctattgtgaga
ataatgaagactcgtaaagtcctaagccatacccttcttattaccgagctcttccaacag
ctgaaatttccaataaaaccagtggatttgaagaaaaggattgaaagcctcattgacagg
gagtacttggagagggataaaaacaaccctcaaatatacaattaccttgcatag

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