Prosopis cineraria: 129286866
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Entry
129286866 CDS
T09047
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129286866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129286866
03036 Chromosome and associated proteins [BR:
pcin03036
]
129286866
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129286866
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129286866
PBAF complex
129286866
GBAF(ncBAF) complex
129286866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
129286866
NCBI-ProteinID:
XP_054778920
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MEEKHREAAVQPSSNVDSPASESASSRRRSGGLKRKGNTLGASNSTPAPSKRVTREKALP
AHPSPVHNGPLTRARQIPSNHATTAASALLAGGGGLAADYSRHSERAVTSEALGRESAAF
AEDIKKESEWEALEAAIETEFEAVRSRGANAHVVPSHCGWFLWTDIHPIEKNALPSFFNG
KTEHRTPDIYMEIRNWIMKKFHAKPNAQIELKDLSELDVGGLDARQEVMEFLDHWGLINF
HPFPSMDNALVSTDDDGATEKQSLVEKLYHFETVQLCPHVIPKTNLMTQDMPSGLFPEST
FVEELVKQEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNGKFGSGMSSTDFIL
MEPAEVQGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEEA
FVDSDVVDANCKETADPAATKNDSSTVKDASETLEHKTSNSDGQVLTPCDQTSKGEDANK
VKSGQETLMPENGSNEKISEGTCRLENAAEVKLGQEAGDNFVLKALGEAFEAIGYSSGPE
GPSSFAEVGNPVMALGGFLARLVGSDMAVASAHSSLKSISSNSPSIELAARHCFLLEDPP
DEKKGPSSFERDSIMDVDQDEGEKQDQSLLTAKDVSNDPRIIANDALEDKRQLTSTDGGA
SEEPVALKEQVLANHEEIVLDNCKNPANSKLFSDCTVQYSDGSTSNAEGTSIKELCQPAE
KMKGECVVSDCLRSEKNELEQSIMSSKAGEKPKSEQAPTGMEALSDSLPLDKSKPQKPLS
RNPVGDCMETTELLTNVDVVSNSLPSENESEPQVTLDLYQHTGTAKDVDMTSLDQNEHSH
PVTSRSGAENGKSTAGEDHTENGRKMVDNNINTKQENKFEKLKRAAISTLAAAAVKAKLL
ANQEEDQIRQLATLLIEKQVHKLETKLAFFNDMDNVVMRVREHLDRSRQKLYHERAMIIA
SRLGIPPSSRGVPPSLPTNRIPMNFVNSAPRPPINMNPQRLPISRSMGNVATTLSNSLSS
PATGNSVLPSSQENLSSVETK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacaccgcgaagccgccgttcaaccgtcgtccaacgtcgattcgccggca
tctgagtcggcttcctcccgccgccgctccggagggttaaaaagaaagggtaacactctc
ggcgcctcgaattccacgcctgcgccctcgaaacgtgttactcgcgagaaggctctgcct
gctcatccttctcccgtacacaatggccccctgaccagggctcgtcaaatcccaagcaac
cacgccactactgccgcttcagccttgctagctggcggcggcggcttggctgctgactat
tcgagacactcagagcgcgcggtgacgtctgaagctctgggtagagaatcggcggcgttt
gcggaggatattaagaaggagagcgagtgggaggctctggaagctgcgattgaaactgaa
ttcgaagctgtcagatctcgtggtgccaatgctcatgtagttccgagtcattgtggttgg
tttttgtggacggatatccatccaattgagaagaatgcattgccttctttctttaatggg
aaaactgaacatcgaactcctgatatttatatggagatacggaattggattatgaagaag
ttccatgcaaaaccaaatgctcagattgagctgaaagacttgtctgaacttgatgttgga
ggtttggatgctaggcaagaggtaatggagtttctggaccattggggtttaattaatttc
cacccttttccatctatggacaatgctttggtcagcactgatgatgatggggcaacagaa
aagcagtccttggttgaaaaattgtatcacttcgaaactgtgcaattgtgtccacatgtt
attccaaagactaacctaatgactcaagatatgccatctggcttgtttccagaatcaaca
tttgttgaagagttggtgaaacaggagggcccagctgttgagtaccactgcaactcctgt
tcagctgattgttcgcgcaaacgctaccattgtcagaagcaggcagattttgatctatgt
tctgattgctttagcaatggaaagtttggctctggtatgtcttcaacggattttatactt
atggaaccagctgaagttcaaggggttagtggtggaaagtggactgatcaggagaccctc
ttgcttcttgaagcattagaactttataaagaaaattggaatgaaattgctgagcacgtt
gcaacgaaaacaaaagctcagtgtatattacactttgttcaaatgccaattgaagaagct
tttgttgacagtgatgttgttgatgccaattgcaaagaaactgctgatccagctgcaact
aaaaatgattcgtctactgtcaaagatgcatcagaaactcttgaacataagaccagtaat
agtgatggacaagtgctgaccccgtgtgatcaaacttcaaagggtgaagatgctaataaa
gtaaaatccggtcaagagactctaatgccagaaaatggcagcaatgagaaaattagtgaa
ggaacttgcagactagaaaatgctgctgaagtgaaactgggacaagaagcaggtgacaat
tttgttctaaaagctcttggggaagcatttgaagctattggttattcttctggacctgaa
ggcccgtcttcatttgctgaggtgggcaatcctgtcatggcattgggaggtttccttgca
cgcttggtgggttctgatatggctgttgcttcagctcatagctccttaaaatccatatct
tctaattctcccagcattgagcttgcagcaagacattgctttcttctggaagatccacct
gatgaaaagaagggaccctctagttttgagagggattctataatggatgtggaccaggat
gaaggtgaaaaacaggatcagtctttattaactgctaaagacgtatcaaatgatccaagg
ataattgcaaatgatgctttagaagacaagagacagttgacctctactgatggtggagcc
tcagaggaacctgttgctttaaaggaacaagtattagctaatcatgaggaaattgtgctt
gataattgtaaaaatccagccaattcaaagttattcagtgattgtactgtccagtattca
gatggttcaacatccaacgctgaaggaacttctattaaagagctttgtcagcctgcagag
aaaatgaagggtgaatgtgtggtgtctgattgtcttcgctctgaaaagaatgaacttgag
cagtccattatgtctagtaaagcaggagaaaagcccaagtctgagcaggcaccaacaggc
atggaggcgttgtctgattctttgcccttagataaaagtaaacctcaaaaacctctatct
agaaatccagttggtgactgtatggaaacaacagaactactaacgaatgttgatgtggtt
tctaattccttgccatcagagaacgaatctgagccgcaggttacactagatttgtatcaa
catacagggacagcaaaggatgttgatatgacatctttggatcagaatgaacattctcat
ccagtcacatcaaggtctggtgctgaaaatgggaaaagcacagcaggtgaagaccacaca
gaaaatggtaggaaaatggtagataataacataaataccaaacaagaaaacaaatttgaa
aaattaaagcgtgctgcgatttctacccttgctgcagcagcggttaaggcaaaacttcta
gcaaatcaagaagaagatcaaattcgacaacttgctacattgttgatagaaaagcaggtg
cataagttggagacaaagttagcctttttcaatgatatggataacgtggtgatgagggtc
agagaacacttggatcgttcacgtcagaagctttaccatgagagagcaatgataattgca
tctcgcctcggtataccaccttcatctagaggtgtacccccttccttaccaaccaatcga
attcctatgaattttgtaaattcagcacctagaccaccaattaatatgaatccccagagg
ctaccaatttctagatccatgggcaatgtggcaaccaccctttcaaattcattatcatca
cctgcaacgggaaattcagttctgccatccagccaggagaacctttcttctgttgagaca
aaataa
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