KEGG   Prosopis cineraria: 129287068
Entry
129287068         CDS       T09047                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pcin  Prosopis cineraria
Pathway
pcin03020  RNA polymerase
pcin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129287068
  09124 Replication and repair
   03420 Nucleotide excision repair
    129287068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcin03021]
    129287068
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129287068
Transcription machinery [BR:pcin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     129287068
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129287068
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 129287068
NCBI-ProteinID: XP_054779192
LinkDB
Position
Unknown
AA seq 188 aa
MEKGGKGYSSLNKGGSLKGKDDSAAKSAKGRRVQFADEGGKGEKTANGGKSPMSKSSKQS
EFGIEQELPKNIKCLMNCEAADILLGIQDQMTMLSKDPSIKIPVSFDKGLQYAKSNSHYK
MSETVRSILEPLADLGVSEAELCVIGNVCPETSEEVYALIPSLKERRSRIEGLLRDMVRE
LGKLKKSK
NT seq 567 nt   +upstreamnt  +downstreamnt
atggagaaaggaggaaaggggtattcgtcgctgaacaaaggaggatccttaaaagggaaa
gatgacagtgctgcaaaatcagcaaaggggaggagagttcagtttgctgatgaaggagga
aagggagagaagactgcaaatgggggaaagagtcctatgtctaaaagctcaaaacaatcg
gagtttgggattgagcaggaacttccaaaaaatatcaaatgcctgatgaattgtgaggct
gctgatattttactaggaattcaagatcagatgaccatgttatctaaagatccatctatt
aaaatacctgtatcatttgacaagggactgcagtatgccaaaagtaatagccattataaa
atgtcggagactgtcaggagcattcttgagcctctggcagatcttggtgtctctgaggct
gagctatgtgtgattggtaatgtgtgtccagaaacttcggaagaggtttatgctctcatc
ccgtcactaaaggagaggaggagcaggattgagggacttctcagagatatggtaagagag
cttgggaagcttaaaaagtcaaagtaa

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