Prosopis cineraria: 129288299
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Entry
129288299 CDS
T09047
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129288299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129288299
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129288299
mRNA degradation factors
5'-3' decay
Lsm complex
129288299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
129288299
NCBI-ProteinID:
XP_054780787
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSTAEIRRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgggcaggccctgaggatatctacctttccacttcactcgccagttatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctactgggaacacttcgctctttt
gatcaatttgctaatgctgttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgcgatatccctttgggcctctacgtaatccgtggggagaatgttgttttgattggt
gagctggacttggaaaaagaggaacttcccccacatatgacacgtgtttcaactgcagaa
attagaagggcacagaaagcagaaagggaggctacagatctgaaaggaacaatgaggaag
aggatggaattcctggacttggactag
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