KEGG   Prosopis cineraria: 129288299
Entry
129288299         CDS       T09047                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pcin  Prosopis cineraria
Pathway
pcin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129288299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcin03019]
    129288299
Messenger RNA biogenesis [BR:pcin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129288299
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129288299
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 129288299
NCBI-ProteinID: XP_054780787
LinkDB
Position
Unknown
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSTAEIRRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcctgggcaggccctgaggatatctacctttccacttcactcgccagttatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctactgggaacacttcgctctttt
gatcaatttgctaatgctgttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgcgatatccctttgggcctctacgtaatccgtggggagaatgttgttttgattggt
gagctggacttggaaaaagaggaacttcccccacatatgacacgtgtttcaactgcagaa
attagaagggcacagaaagcagaaagggaggctacagatctgaaaggaacaatgaggaag
aggatggaattcctggacttggactag

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