Prosopis cineraria: 129288675
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Entry
129288675 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129288675
03036 Chromosome and associated proteins [BR:
pcin03036
]
129288675
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129288675
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
Pre-60S particles
Helicases
129288675
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129288675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
129288675
NCBI-ProteinID:
XP_054781364
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MPSLPVSDVILSETPKDKKEKKKKIKNEAPIEDGVTVKKKKESKKRKALDAEKMASEDDV
KSETSSELVEPDSVKSKSEEKRKKKKAKLDEPEVQGEEVEKENPNAISNFRISAPLRAKL
KEKGIESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPAKAARKTGY
GSAPCVLVLLPTRELANQVFADFEVYGGALGLASCVLYGGAPYQAQEFKLKRGVDIVVGT
PGRIKDHLERKNLDLSQLRFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATL
PDWVKSISMKFLKSNKKTADLVGNEKMKASINVRHIVLPCSSSARSQLIPDVIRCYCNGG
RTIIFTETKESASELAGLLPGARALHGDIQQSQREVTLAGFRAGKFTTLVATNVAARGLD
INDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERASGVKFEHI
SAPQPADIAKAAGGNAAKLITQVSDSVIPAFKSAAEDLLNNSGLTAVELLAKALAKTIGY
TDIKKRSLLTSMENHVTLLLEIGRPIYSPSFAFGILRRFLPQEKVDSIKGLTLTADGNGA
VFDVSAEDLDTFLNGQENAANVSLEVLEALPSLQEREQSRGRFGGGRGGGGNRFSGGRGG
GRFSNDRNGRFSNNSRSGRGRGNNGAKRW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctacctgtctctgatgttattctctctgagactcccaaagataaaaaggag
aagaagaagaagataaagaacgaggctccaattgaagatggggttacggtgaagaagaag
aaggagagcaagaagcgtaaagctttggatgctgagaagatggcgagtgaggatgatgta
aagagtgagacgagttctgagttggttgagcctgatagtgtgaaatctaagagtgaggag
aagaggaagaagaaaaaggctaagttggacgagcctgaagttcaaggggaagaggttgag
aaggagaatcctaatgcaatttcgaactttaggatatcggcgccgttgagggccaagttg
aaagagaaggggattgaatcgttatttcccatccaggcgatgacttttgataccatccta
gacggctctgatctggttggtcgagctcgcactgggcagggtaagactcttgcctttgtg
ctacccatattagagtctttaataaatggtcctgcaaaagcagccagaaagactggatat
ggaagcgctccttgtgttcttgtgctcttacctactagagaattggccaaccaggtgttt
gctgattttgaagtttatggtggggcactgggattggcctcttgtgttttatatggtgga
gctccatatcaagcacaagaatttaaactcaagaggggtgttgatattgttgttggaact
ccaggacgcataaaagatcatttagagaggaaaaatcttgacctgagccaactaaggttc
cgtgtactggatgaagcggatgagatgctgaggatgggtttcgttgaagatgttgaactc
attttgggtaaagtagaggatgttagtaaagttcagacacttcttttcagtgctactttg
ccagactgggttaagagtatttctatgaaatttctgaaatctaacaaaaaaactgctgac
ctggtgggcaatgagaaaatgaaagctagcattaatgttaggcatattgttctcccatgt
tctagttctgccaggtcccaacttattccagatgttatacgttgctattgcaatggaggt
cggacaattatatttactgagacaaaggagtctgcttctgagcttgcagggctgttgcct
ggtgcacgagctctgcatggtgatatacagcagtcacaacgtgaggtcaccttagctggt
ttcagggctgggaagtttacaacattagtggccactaatgtggcagcccgtggtttggac
attaatgatgttcagttaattatccagtgtgaacccccacgtgatgtagaagactatatc
catcgatctgggcgcactggaagagcaggtaatactggagttgctgtgatgctttatgat
ccaagaaggtcaaatatatcaaaaatagaaagagcatctggtgtgaaatttgaacacata
tctgctcctcagcctgctgatattgccaaagctgctggtgggaatgctgctaaattgata
acccaggtgtctgatagtgtcatccctgctttcaaatctgctgcggaggatcttttaaac
aattcaggcttaacagctgttgaattacttgcaaaagctcttgccaagactattggttat
actgacataaagaaaagatcactactcacttccatggagaaccatgtcacgttacttctt
gagattggcagacccatctattccccttcatttgcatttggaatcttgaggagattcttg
cctcaggagaaggttgactcaatcaagggtcttactctcactgcagatggaaatggtgct
gtttttgatgtgtcagctgaagacttagatacctttctgaatggtcaggaaaatgctgct
aacgttagtttagaagtattggaggcattgccaagtttgcaagaaagagaacaatcaaga
ggtagatttggtggtggtcgaggcggtggcggcaataggttttctggtggaaggggtggc
ggcagattttctaatgacagaaatggtaggttttccaataattctagaagtgggagaggt
aggggcaacaatggggcaaagaggtggtga
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