Prosopis cineraria: 129288789
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Entry
129288789 CDS
T09047
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129288789
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129288789
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
129288789
NCBI-ProteinID:
XP_054781505
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MMEASLKWSFIVFVLTMVLLLSSAKPLNGDENEKGRLVMSRNVETEKLQNLKNSSMADRL
NDAPNEHAVDNPEEIASMVDMSIRNHTERRNLGFFSCVTGNPIDDCWRCDKLWHRRRKRL
ANCGIGFGRNAIGGRDGRFYIVTDPSDDDPVNPRPGTLRHAVIQDRPLWIVFKRSMVITL
KQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKRTGNAMVRSSPTHY
GWRTMADGDGISIFGSSHIWIDHNSMSNCADGLVDAIMGSTGITISNNYFTHHNEVMLLG
HSDTYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYLAPRNRFAKEVTKRVGTDTRIWKHWNWRSMGDLMLNGAYFTSSGAGAAASYARA
SSLGAKSSSMVGIITSGAGVLNCRRGFTC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcttctctgaaatggtcattcatcgttttcgttctgactatggtgctgctt
ttatctagcgccaagccattgaatggggatgaaaatgagaaaggccgtcttgtaatgtca
aggaatgtagaaacagagaagttgcagaatttgaagaattcatcaatggcggacaggtta
aacgatgctccaaatgaacacgcagtggataatccagaggagatagcttccatggttgat
atgagcatacgcaatcatactgaaagaaggaatctgggtttcttctcatgtgtgactgga
aatccaattgatgactgctggcgctgcgacaaactttggcacagacggcgaaagcgtttg
gccaattgtgggattgggtttggacgtaatgccataggtggccgtgacggtaggttctat
attgtgactgatccaagtgatgacgatcctgtcaacccaagaccaggtaccctgcgccat
gcggttattcaagatagacccttatggattgtgttcaagaggtccatggttatcacttta
aagcaagagcttatcatgaacagcttcaagaccatagatggtcgtggagtgaatgtgcac
attgcctatggggcttgcattactatacaattcatcaccaatgtcatcatccatggttta
catatccatgattgcaaacgaactggtaatgcaatggttcgtagctcaccaactcattat
ggttggagaactatggctgatggagatggcatttccatttttggttcaagccacatttgg
attgaccataattcaatgtctaattgcgctgatggccttgttgatgcaattatggggtcc
actggtattaccatttccaacaattacttcacccaccacaacgaggttatgctactgggc
cacagtgatacatatgtaagagataagcaaatgcaagtaaccattgcctacaatcatttt
ggggagggtcttatccagagaatgccgaggtgcaggcatgggtatttccatgtggtaaac
aatgactatacccactgggaaatgtatgcaattggtggaagtgctaatcccacaattaac
agccaaggcaaccgataccttgcccctcgaaaccgttttgctaaggaggtgacaaagaga
gtgggtacagacacaaggatatggaagcactggaactggaggtcaatgggagaccttatg
ttgaatggagcctacttcacttcatcaggagctggtgctgcagcaagttatgccagagcc
tccagtttaggggccaagtcatcttccatggttggtatcattacttctggagctggtgtt
cttaactgccgcaggggcttcacctgttaa
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