Prosopis cineraria: 129289504
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Entry
129289504 CDS
T09047
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129289504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129289504
03036 Chromosome and associated proteins [BR:
pcin03036
]
129289504
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129289504
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129289504
Chromatin remodeling factors
BAF complex
129289504
PBAF complex
129289504
GBAF(ncBAF) complex
129289504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
SnoaL_3
Bromodomain
BipA_C
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
129289504
NCBI-ProteinID:
XP_054782252
LinkDB
All DBs
Position
Unknown
AA seq
2274 aa
AA seq
DB search
MQSVGGGPARNPGVGPAGRATSTSSAASPSSSSSAVSTSHLGLDSLQQQQQQPQQQIGSR
QSLHQQLLRKPEGNEAFLAYQAALQGAFGGNNFSSPSAMQLPQQSRKFNELTQHGPNQEA
LLKGQNIEQQMLNPVHQAYLQYAHQAAQQKSALAVHSQQQNKMGMLVPSSVKDQEMRMGN
LKMQELMSMQAVNQAQGSTSRNVPEQFSRGEKKIEQGQQLAPDLKGEGKPSTQGPAVAQL
MPGNMIRPVQTPVDRQGIQNVMSNQIAVSAQLQAMQAWARERNIDLSHPANANLIAQIFP
MKQSRIVSQQKANESSMGAQSSLVPVSKQQVTSPAGASDSSAHANSSSDASGLSGPAKAR
QLPANHFGPPTNVVTASHSGDTAVQQFNNHNRESQVSMRQPVLVGNGMPSAQPQQSSTSM
NLGSEHHFNAKNTLSGPEPPQTQYLRKLNQLSSQASGATNEGGSGNYVKSQGAPSQMSQQ
RHGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRSIVPPTLELQSQQPIHPSGGQNQDN
SAGNIMPEHSRHIESEAKDLQHIHAVNGHGSSKHETSARDEKSTVSAVHMQAKPVVTKDP
APMLSSQREEQQPFGCSVKSDQESERETNRNPVRNELLLDKGKAIAPQPSASESMQNKNP
AQTSTVGQPKDVGSTRKYHGPLFDFPFFTRKHDSFGSSMMVSSNNNLLLAYDVKDLLVDE
GTEVINKKRVENLKKIEGLLANNSERKLIRPDLVMRLQIEEKKLHLRGLQVRLRDEIDQQ
QQEIMAMPDRQYRKFVRLCERQRMELARQVQASQRAIREKQLKSIFQWRKKLLEAHWAIR
DARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVDRYREMLLEQQTSIPGDAA
ERYSVLSTFLTQTEEYLQKLGSKITAAKNQQEVEEAGKVAAAAARLQGLSEEEVRAAAAC
AGEEVMIRNRFMEMNAPKDGSSVSKYYSLAHAVNEKVIRQPSMLRAGTLRDYQLVGLQWM
LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKVKRTPF
KRTPFSWTFLSFVAVHFNMAVFVVQSEFYNWLPSVSCIFYVGGKDQRSKLFSQEVCALKF
NVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPL
QNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLH
QILEPFMLRRRVEDVEGMLPPKVSIVLRCRMSAIQSAIYDWVKSTGTLRLDPEDEKHKVQ
KNPVYQTKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDFLVKSCGKLWILDRILIKLQ
RTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFL
LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISS
YQKEDELRSGGTVDMEEELVGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTH
EERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSKEELELFDQMDEELDWIEEMTKY
DQVPKWLRVSTREVNATIAALSRKPSKNTLLGGDVSVQSSEMGSERRRGRPKGKKNLNYK
ELDDENEEFSEASSDERNEYSAHEDEGEIGEFEDDGLSVADGTQPNDKDQLEEDGPICDA
AYEFPQSTENVRNSLTAEGSGSPGTSSGSQRLTQTVSPSVSSQKFGSLSALDARPGSLSK
RITDELEEGEIAVSGDSHMDNQQSGSWIHDRDEGEDEQVLQPKIKRKRSLRVRPRHALER
PEEKSGGEGGSLHRGGSSLLAVHVDHRYEVQSKTDPDEKSFGGSNAGRHDQNESSLKVKR
NLPSRRVSATSKLQGSPKSSRLNCISTPSEDGGHSRESWEGKPINSSGSLALSSKMPEII
QRRCKNVISKLQRRIDKEGQQIVPLLKDLWKRIENSGYTGGSGNSLLDLRKIDQRIDRVE
YSGVMELVFDVQFMLKSAMHFYGFSHEVRSEARKVHDLFFDILKIAFPDTDFREARNALP
FTGQISASAVTSPRQMAGSQTKRHRTLNEVEIDANPSQKHLQRGSASSGENTRIKVHIPQ
KESKSGNGGGNNRELQPDDSPLLTHPGELVVCKKRRNDRDKSLAKSRTGSVGPVSPPSVV
PAARSPGLGSVPKDARMAIGQPCQQPNGSGGSVGWANPVKRLRSDSGKRRPSHL
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggttgggggtgggcccgcccggaacccgggggtggggccggctgggcgggcg
acatctacatcgtcagccgcatcaccatcttcttcatcgtcggcagtgtcaacgtcgcat
ttggggctggactcgttgcagcagcagcagcagcaaccacagcagcagataggttctagg
cagtcattgcaccagcagttacttcgaaaacctgaagggaatgaagcctttttagcatat
caagcagcccttcaaggggcatttgggggtaacaatttttcatctcccagtgccatgcag
ttgcctcaacaatctcggaaattcaatgaattaactcaacatggtcccaaccaagaggct
cttctcaagggtcaaaacattgagcagcaaatgctaaatcctgttcatcaagcatacctt
caatatgcacaccaggctgcccaacaaaagtctgctttggcagttcattctcagcagcag
aataaaatgggaatgttagtgccttcatctgtgaaagatcaagaaatgcgtatgggaaat
ttgaaaatgcaggagcttatgtctatgcaggcagtaaatcaagctcaaggatctacctcc
aggaatgtacccgaacaattttctcgtggggaaaagaagatagagcagggacagcagtta
gcccctgatctaaaaggtgagggaaagccttcaacccagggaccagccgtggcacaatta
atgcctggaaatatgatacgacctgtgcaaacacctgttgatcggcagggcatccaaaat
gtcatgagcaaccagattgcagtgtctgctcaattacaggctatgcaggcatgggcacgt
gagcgtaatattgatctatcacatcctgcaaacgctaacttaattgcacaaatctttcct
atgaagcaatcaaggatagtttctcaacaaaaagcaaatgagagcagcatgggtgctcag
tcatcactagtacctgtttcgaagcagcaggttacatctccagcaggtgcaagtgatagc
tctgcacatgctaattcatcaagtgatgcatctgggctgtctggtcctgcaaaagccagg
cagctacctgccaaccattttggcccgccaacaaacgttgttactgctagccactctggt
gacacagcagtgcaacaatttaataatcataacagagagtctcaagtatctatgaggcaa
cctgtcttagttggaaatggaatgccttctgcacaaccccaacagtcttctaccagcatg
aatttgggttcagaacatcattttaatgcaaaaaatacattatctggtccagaacctcca
caaacgcagtatttaaggaagttaaaccaattgtcttctcaggcatctggtgctacaaat
gaagggggctcaggaaattatgtgaaatcccaaggggcaccatctcagatgtctcaacaa
cgacatggatttaccaaacaacagctgcatgttcttaaagcacagatactggcattcagg
cggctcaagaaaggagagggtacccttccccaagagcttcttcggtctattgttccacca
actcttgagctgcaatctcagcagccaatccatccttctggaggacagaatcaagataat
tcagctggaaatatcatgccagaacactcaaggcacatagaatctgaagcaaaggacttg
caacatatccatgcagttaatggacatggttcttcaaagcatgaaacttctgccagagat
gagaaatccactgtctcagcagttcatatgcaagctaagcctgttgtgacaaaggatcct
gctccaatgttgtcttctcaaagggaagagcagcaaccatttggttgctctgttaagtca
gatcaggaaagtgaacgtgaaactaacagaaatcctgttaggaatgagttgctgttagac
aagggaaaggccattgcaccacagccttctgcatctgagtcaatgcaaaataagaaccct
gcacaaacaagcacagttgggcagccaaaagacgtaggatctacaagaaaataccatgga
cctctatttgatttccccttctttaccaggaaacatgactcctttgggtcgtcaatgatg
gtaagcagcaacaataatttgttgctggcatatgatgtcaaagatcttctagttgacgaa
ggaacggaagtaattaacaagaaaagggtagagaatttaaagaagattgaaggtctacta
gcaaataactcagagaggaagctaattaggccagatcttgtgatgaggttacaaattgaa
gagaaaaagcttcatcttagaggccttcaggtgcgtttaagggatgagattgatcaacag
cagcaagagataatggcaatgccagatcggcaatatcgtaagtttgttagattgtgtgag
cgtcaacgtatggaattggctaggcaagtacaggcatctcagagagctataagggagaag
caactgaaatctatatttcagtggcgtaagaagcttcttgaggcgcattgggcaattcgt
gatgctcggactgctcggaataggggggtagccaaatatcatgagagaatgttaagggag
ttttcaaaacgtaaagatgacgacaggaacaaaaggatggaagccttgaaaaataatgat
gttgacagatatagggagatgttgctggagcagcagactagtatcccgggtgatgctgct
gagagatattctgttctttcaactttcttaacgcagacagaagagtatcttcagaagctt
ggaagtaagataacagctgccaagaatcaacaggaagtagaggaggcaggaaaagttgct
gcagctgctgcacggttgcagggtctttctgaagaagaagtcagagctgcagcagcttgt
gctggagaagaagtgatgattagaaatcgttttatggagatgaatgctcctaaagatggt
tcatctgtcagcaagtattactcacttgctcatgctgtgaatgagaaggtcataaggcaa
ccatcaatgttgcgggctggaacattgagagattatcagcttgttggcttgcaatggatg
ctttctttgtataacaataagttaaatggaattttggcggatgagatgggtcttggcaaa
actgtgcaggttatggcattgattgcctatttgatggaattcaaagggaactacggccca
catctcataatagtcccgaatgctgttttggttaactggaaggtaaaacgcactcctttt
aaacgcactcctttttcttggacgttcctttcctttgtggctgtgcactttaacatggcg
gtgttcgttgtgcagagtgaattttataactggttaccatctgtgtcatgcattttttat
gttggagggaaggatcaacgatcaaaattattttctcaagaggtttgtgcgttgaaattt
aatgtccttgtgacaacttatgagttcatcatgtatgaccggtcaaagctttcaaaaatt
gattggaagtatatcataattgatgaagcacagaggatgaaagatagggattcagttctg
gcacgtgatcttgatcgatatcgttgtcagagacgcctgcttttgactggaaccccctta
cagaatgatttgaaggagctttggtcccttttaaacttactccttcctgaggtttttgac
aatcgaaaagcatttcatgattggttctcgaaaccttttcaaaaggaaggccctagtcaa
aatgcagaggatgattggcttgagacagaaaagaaagttataattatccacagacttcat
cagattcttgagccattcatgctcaggcgtcgtgttgaagatgtagaaggcatgctgcca
ccaaaggtctctatagttttgcgatgtagaatgtcagctatacagagtgctatttatgac
tgggtcaaatccactggtacccttcgtcttgatcctgaggatgagaaacataaggttcaa
aagaatccagtctaccagacaaagcaatataaaacgttaaataacagatgcatggagcta
cgtaaaacttgcaatcatccattgcttaactatccattcttcagtgacttatccaaagat
ttccttgtaaaatcttgtgggaaactgtggatcttggatcgaatccttataaaacttcaa
aggactggacacagagttctgctctttagtacaatgactaaactcttagacattttggaa
gaatacctgcaatggcgacggcttgtctaccggagaattgatgggacaacgagtttggaa
gatcgtgaatcagccatagtggatttcaatagtgctggttcagactgtttcatcttcttg
cttagtattcgagctgctgggcgaggccttaaccttcagtctgctgacactgtagtcata
tatgatcctgacccaaatcctaaaaatgaggagcaggcagttgctagagctcatcgcatt
gggcagaaaagagaagtcaaagttatctacatggaagctgttgtagacaaaatctccagc
tatcaaaaagaggatgaactgagaagtggaggcactgttgatatggaggaagaacttgta
ggtaaggatcgttatattggatccattgaaagcctgataaggaacaatattcaacagtat
aagattgatatggccgatgaggtcattaatgctggacgttttgaccaaagaacaacacat
gaagagagacgcttgactttggagacattattacatgatgaagaaaggtaccaggagact
gtccatgatgttccctctttacaggaggtaaatcgcatgattgctaggagtaaggaggaa
cttgaattgtttgatcaaatggatgaggaattggattggattgaagagatgacaaagtat
gatcaggtgcctaagtggcttcgagtaagtacaagagaagtaaatgccactattgctgct
ttatctagaaaaccatcaaagaacactctattaggcggtgatgtcagcgtgcaatccagt
gaaatgggatctgaaaggagaagaggacgacccaagggaaagaagaatcttaattacaaa
gagttagatgatgaaaatgaagaattctctgaagcaagttctgatgaaagaaatgaatat
tcagcccatgaagatgaaggggaaattggagaatttgaagatgatgggcttagtgtggca
gatggaactcaacccaatgataaggatcaattggaagaagatggtccaatttgtgatgct
gcatatgaatttcctcagtccacagaaaatgtaagaaacagtctgacagctgaaggatct
ggatcccctggaacatcctcaggcagtcaaagattaacacagacagtatctccttcagtt
tcctctcagaaatttggttccctctctgcactggatgccaggccaggttccctttcaaaa
aggattactgatgagttagaggagggagaaattgctgtatctggtgattctcacatggat
aatcaacaatctgggagttggattcatgatcgtgatgaaggtgaagatgaacaagttttg
caacctaagattaagcggaaacgtagtcttcgtgttcgacctcgtcatgccctggagagg
cctgaggaaaagtctggtggtgaggggggatctcttcaccgaggaggatcctctcttttg
gctgttcatgtagaccatagatatgaagtgcaatcaaagaccgatcctgatgaaaagtca
tttggaggctccaatgctggcaggcatgatcaaaacgaatcatccttaaaagtaaagaga
aatttaccttcaagaagagtatctgctacctccaaattacagggctcacctaagtctagc
agattgaactgcatttctactccttctgaggacggtggacactcaagagaaagttgggag
gggaagcctatcaactctagtgggtctttggccttgtcctccaaaatgcctgaaatcatc
cagagaaggtgtaagaatgtaattagcaagctccaaaggagaatagacaaggaaggtcaa
caaattgtacctttgctaaaagatttatggaagaggattgaaaattcagggtacacaggt
ggatctgggaacagtctattggatttgcggaagattgaccagcgaattgatagagtggag
tatagtggagtgatggagcttgtgtttgatgtgcagttcatgctgaagagtgcaatgcat
ttttatggattttcacatgaggtaagatctgaagcgagaaaggttcatgatctctttttt
gatatcttaaaaattgcttttcctgatacggattttcgagaggcaagaaatgcgcttcct
ttcacgggtcaaatttcagccagtgctgtaacatctcccagacagatggctggcagccaa
accaagaggcacaggacattaaatgaggtggaaattgatgcaaacccttcacagaagcac
ctgcagcgtggatctgcttcaagtggggaaaacaccaggatcaaagttcatattccacag
aaggaatcaaaatctggaaatggaggtggcaacaaccgagaacttcagccggatgattct
ccgctgcttactcatccaggtgaactggttgtatgcaagaagagaagaaatgacagggac
aaatcattggccaagtctaggactgggtcagttggcccggtctcaccacctagcgtggta
cctgctgcaagaagtccagggcttggttccgtcccaaaggatgctagaatggcgattggc
cagccatgtcagcaaccaaatggatctggtgggtcagttggctgggcgaatccagtaaag
cgattaaggtcagattctgggaagagaagaccaagtcatctgtag
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integrated database retrieval system
