Prosopis cineraria: 129290711
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Entry
129290711 CDS
T09047
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pcin
Prosopis cineraria
Pathway
pcin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129290711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129290711
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129290711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
129290711
NCBI-ProteinID:
XP_054783573
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MHRKRRLHQLKHPFDSHPFEAILHGSWQALRYITIEGGTMVFHFKGNNHVVREKAPISDL
RIRSRKATVSDCSSFLRPGIDICVLSSFQQTNGSDQNNLNPVWVDAKISSIQRKPHEPGC
LCQYYVNVYVNQGCVGSEVRTLSKEIKVVGINQISILQRLEHSPCEDQHYRWDSSEDWHA
VPQTKLLSGKFLSDISWLIVSSVLKQVSFCVRSAGNKIVYQIMGVDDNSFLLDVVNFRID
NSMLVPIVSQVISSDTDKVDNTDDSHKDKAFSSYNPEGLRRSKRRNVQPERYLGCDETHV
LDVGFVRTRPYKMDIRKDDGEDDELSMPLSSLIGLQKNYGVMDDGSGLKFNKMTSYNKLK
VYKRRPKSKEVNSGDVNINEIQSQLAIVPVPQECDPINIEHFDSNAKVSKYYTQRNVECP
TKHYHVMGSPEPKRNNMDLLTFESYNHPSKIPGLEDCVEEIDDIASRCHYNLGTPKIKRK
NSFGLNDTDFESRWEGINSDKAVQGKKYHSTISRGKQSDEERTYKARSLSAGAYKELIDS
YLKNMNAKPSEAEPPITEQWIQFKETSNLGQKGETKSPQIEDEKETDELDILWREMEVSL
ASSYVEEDTEGSSAAVFTETWEKTDSLCRHDYRMNEEIGIYCLLCGIVSAEMKDVFPPFL
ERSMWHHEEKQHSREGSEPEPKADENDSFHLFLSDALPDQPITGENDNVWALIPELRWKL
HIHQRKAFEFLWKNIAGSMDPTLMEAASKKRGGCVISHSPGAGKTFLIIAFLVSYLKLFP
GKRPLVLAPKTTLYTWYKEFIKWKIPIPVYLIHGRRTYRAFKQNAVVFHGGPKPTDDVKH
ILDCLEKIQKWHAHPSVLVMGYTSFLTLMREDSKFSHRKYMAKVLRESPGILILDEGHNP
RSTKSRLRKGLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFAFEVLKKLDPKYRRK
TKGTGKARHLIEARARKFFLDNIAKKVDSNDGKEQKQGLNMLRKMTSGFIDVYENGNSED
LPGLQIYTLLMNTTDIQHEILNKLQKKMSGCNGYPLELELLITLGSIHPWLVKTAACAEK
FFSIEQLMELEKWKYDLKKGSKVKFVLSLVYRVVRSEKVLMFCHNIAPVRLFTELFEKFF
GWHRGQEVLVLTGELELFERGRIMDKFEDPNGASKILLASISSCAEGISLTAASRVILLD
SEWNPSKTKQAVARAFRPGQQKMVYVYQLLATGTLEEDKYGRTTWKEWVSNMIFSEEFVQ
DPSRWQAEKIEDDILREMVAEDRSNSFHKIMKNENASTN
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaaagaggcgtttacatcaattgaagcatccatttgattctcacccatttgag
gcaattctccatgggtcatggcaagctttgaggtacataacgattgagggaggaacaatg
gtctttcattttaaaggtaacaaccatgtggttagagagaaagctcccatttcagacctt
cggataagatctaggaaagcaactgtatcagattgctccagctttttaagaccaggaatt
gacatatgtgtactttcttcctttcaacaaactaatggctcagatcaaaataatcttaat
cctgtgtgggttgatgctaaaataagttctatacagagaaagccacatgaacctgggtgc
ttgtgtcaatattatgtgaacgtttatgttaatcaaggttgtgttggttctgaggtaaga
actctgagtaaggagatcaaagtagttggaataaatcaaatatctattctccaaaggctt
gagcatagtccttgtgaagatcagcactatcgatgggattcatctgaggattggcatgca
gtgccacaaactaaattgctttcagggaaatttctatctgatatttcatggttaattgtc
tcatctgttttaaagcaggtttcattttgtgtgagatctgcaggtaacaagattgtgtat
caaatcatgggggtggatgataatagcttcctgttggatgttgtaaatttcagaatagac
aacagcatgttagtacccattgtttcccaggttatttcatctgacactgataaggttgac
aatacagatgactcccataaagataaagcattttcatcttataatcctgagggtttgcgt
cgttccaaacgtcgaaatgtacaacctgagcgctaccttggctgtgatgagactcatgtg
ttggatgttggttttgttcgaaccaggccatacaagatggacattcgaaaagatgatgga
gaggatgatgaattgtcaatgccattatcatccctgattggtttgcaaaaaaattatgga
gtgatggatgatggcagtggactgaagtttaataagatgacgtcttacaacaaacttaaa
gtgtataaaaggaggcctaagtctaaggaggtgaattcaggtgatgtcaatataaatgaa
attcaatctcaacttgccattgttcctgttcctcaagaatgtgatcctattaacattgag
cattttgattccaatgccaaggtctctaaatattacacacaaagaaatgttgaatgtcct
accaaacattatcatgtgatgggcagtcctgaaccaaagaggaataatatggatttgtta
acttttgaatcctataatcatccttcaaagattccaggtcttgaagattgtgttgaagag
attgatgatattgcttcccgatgtcattataatcttggcacccctaaaataaagaggaag
aattcatttggtttgaatgatacggattttgaaagcagatgggaagggataaattctgat
aaagcagttcaagggaaaaaatatcattcaacaatttcaagaggcaaacaatctgatgaa
gaaagaacttataaagctaggtccttaagtgcaggtgcctacaaggaattgatagactca
tatttaaagaatatgaatgcaaaaccatctgaagcagagccacctattactgagcagtgg
atacaattcaaggaaacaagtaacttaggacaaaagggggaaacaaagtcaccccaaatt
gaggatgagaaagaaaccgatgaactagatatattgtggagagaaatggaagtttcactg
gcatcaagttatgttgaagaagacacagagggttcaagtgctgcagtttttactgagacc
tgggaaaaaactgattcactttgtcgccatgattatagaatgaatgaagaaattggaatt
tactgtctattatgtggcattgtcagtgctgagatgaaagatgttttcccaccctttttg
gaacgttcaatgtggcaccatgaggagaagcaacacagcagagaaggttcagaaccagag
ccaaaggctgatgaaaatgatagtttccatctttttttgtctgatgctctgcctgatcaa
cctataactggagaaaatgacaatgtgtgggctttaattcctgaacttaggtggaagttg
cacatccaccaaagaaaagcttttgaatttctttggaaaaatattgctgggtctatggac
ccgacacttatggaagcggcatccaaaaaaagaggtggttgtgtgatatctcattctcct
ggagctggaaaaacattccttattattgcatttcttgttagctacttgaagttattccca
gggaagcgacctttggttcttgctcctaagacaacactttacacatggtacaaagaattt
atcaaatggaaaattcctattccagtatatctaattcatggtcgtagaacctaccgagca
ttcaagcagaatgcagtggtttttcatggtggtccaaagcctactgatgatgtcaagcat
attttggattgcctggaaaagatacaaaagtggcacgcacatccaagtgttctagtcatg
ggttatacttcatttttaacattgatgcgagaggattcaaagttttctcacaggaagtac
atggctaaagtattgagggaaagtcctggtattcttatattggatgaagggcacaatcct
agaagcacaaagtcaaggttgaggaaaggtttgatgaaagtacaaacagaattgagaata
ttactttcgggcacattgtttcagaacaatttctgcgaatacttcaacactctttgcttg
gcaagaccaaagtttgcttttgaagtgttgaaaaaactggaccctaaatacaggaggaag
acgaaaggaacaggaaaagcacgtcatttgatagaggcgcgagctagaaaattcttcttg
gataatattgctaaaaaagttgactcaaatgatggaaaagagcaaaagcagggtctgaac
atgttgagaaagatgaccagtggttttatagatgtttatgaaaatgggaactcagaggat
cttcctggtttacaaatctatacattgttaatgaatactactgatatacagcatgagatt
ttgaataaactccagaagaaaatgtctgggtgcaatggatatcctttggagttagagctt
ttgataacccttggatcaatacatccttggttagtcaaaacagccgcatgtgctgagaag
tttttctctatagagcaattgatggagctagagaaatggaaatatgatttaaaaaaaggg
tcaaaagtgaaatttgttttgagcctggtctaccgtgttgtcaggagtgagaaggttctt
atgttttgccataacattgcacctgtgaggttatttacagaattatttgagaagttcttt
ggatggcatagaggtcaagaagtcttggttcttactggggagctagagctctttgaacga
ggaaggataatggataagtttgaggatcctaatggagcatcaaagatacttcttgcttca
atttcatcttgtgctgaaggcattagtttgacagcagcctctcgggtgattttattggat
tcagaatggaatccatccaagacaaaacaggctgttgcacgtgcttttcgtcctggtcag
caaaagatggtttatgtgtaccagctgctggcaacaggcacattggaggaagataagtat
ggaagaacaacttggaaagagtgggtttccaacatgatttttagtgaagaatttgtgcaa
gacccttcccgttggcaagcagaaaagattgaagatgatatattgcgagaaatggttgca
gaagaccgctccaattcattccataagattatgaagaatgaaaatgcatccacaaactga
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