KEGG   Prosopis cineraria: 129290975
Entry
129290975         CDS       T09047                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
  KO
K10752  histone-binding protein RBBP4
Organism
pcin  Prosopis cineraria
Pathway
pcin03082  ATP-dependent chromatin remodeling
pcin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129290975
   03083 Polycomb repressive complex
    129290975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcin03036]
    129290975
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     129290975
  Histone modification proteins
   HAT complexes
    HATB complex
     129290975
   HDAC complexes
    Sin3A-HDAC complex
     129290975
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     129290975
    PRC2.2
     129290975
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     129290975
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129290975
  Chromatin remodeling factors
   NuRD complex
    129290975
   NuRF complex
    129290975
   NuRF complex (fruit fly)
    129290975
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd EIF3I WDR55 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR90_POC16_2nd eIF2A
Other DBs
NCBI-GeneID: 129290975
NCBI-ProteinID: XP_054784017
LinkDB
Position
Unknown
AA seq 469 aa
MKGSYDIPVSTNVQRRYNRWKFFIPLIYDWLLNHNLYWPSLSCRWGPQLDETSNTKKQRL
YLTEQTDDASAPNTLIIADSEIVKPRVATEDIRKFNEDERSPNIKKNKAIIHPGEVNIIR
EMPQNNNLLATHSDRPEESLSNLVLIWDIDAQPARHAIPGAEHSIPNLKLIGHTDDAQFA
LEISAIEPYVLSGGKDMNVVLWNVNDHITYLAAASNLGPRTHHVPSVFPRGTYRGHTNTV
EDVEFCPTSAQEFCSVGDDSTLILWDARVGPDPVIKVEEAHHEDDIHCVEWNNFDVNYIL
TGSADRSVHMYDRRNLNNGRGQNPVYTFQGHDAAVLCVQWCPEKPSVFGTSGDDGIVNIW
DHEKVGRASSSSAGLREERTPPGLFFRHVGHRQKVVEFQWNPSDPWTIVSLSNDCRGRGG
GTLQMWRMLDIIHEEDGNEERKMAELNRLRPWSRGLTTSFIRDLSFSFY
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaaaggaagttatgacattcctgtgtccaccaatgtgcagagaagatacaatcgttgg
aaattttttattccgctcatatacgactggctcctcaatcacaatctttattggccctct
ctctcttgccggtggggccctcaattggatgaaactagtaatacaaagaaacagcggctg
tacctcactgaacagactgatgacgcgagtgctccaaatactctaatcatagcagactct
gagattgttaagcctagggttgcaacggaagacatcagaaagtttaatgaagatgaacgc
tcccccaatatcaagaagaacaaagccattattcaccccggcgaggttaacataatcagg
gaaatgccacagaataataatctgttggcaacacactcagacaggcctgaggaaagtttg
tctaatttagtgctaatttgggacattgacgcacaaccagctcgccatgctatccctgga
gctgaacattcaataccaaatctgaaactgattggtcacaccgatgatgctcaatttgct
ttggagatttctgctattgaaccctatgttctttctggagggaaggacatgaatgttgtt
ttatggaatgtcaatgaccatatcacatacttagcagcagcatctaaccttggacctagg
acccatcatgtcccatctgtcttcccacgtggcacctaccgaggccacacaaatactgtg
gaagatgtggaattttgccccacaagtgcacaagagttttgcagtgtaggggacgattct
actctaatactatgggatgcgcgagttggtccggatcctgttatcaaggtggaggaagct
catcatgaggatgatatccattgcgtcgaatggaataacttcgacgttaattatattctg
actggttctgctgataggtcagttcatatgtatgatcgtcgaaaccttaacaatggccgt
ggacagaatcctgtttatacattccagggccatgatgccgcggtcctttgtgttcagtgg
tgtcccgagaaaccatccgtctttggcacttctggcgatgatggcatcgtcaacatatgg
gaccatgaaaaggttgggagagcttcatcatcttctgctggtttgagagaagaaaggact
cctcctggtttattctttcgacatgttggacataggcaaaaggttgttgaattccagtgg
aatccatcagatccatggaccattgttagcctgtccaatgactgcagaggacgtggagga
gggacgttgcagatgtggagaatgttggatataatacatgaagaggatgggaatgaagag
agaaagatggcagagctgaataggttgagaccatggagtcgaggactaacaacatcgttc
attagagatttaagcttttccttctactag

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