Prosopis cineraria: 129292788
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Entry
129292788 CDS
T09047
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129292788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129292788
Spliceosome [BR:
pcin03041
]
Complex A
U1 snRNP components
U1 related factors
129292788
Complex B
129292788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Borrelia_P83
WW_2
SMODS
Motif
Other DBs
NCBI-GeneID:
129292788
NCBI-ProteinID:
XP_054786407
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MSNNPQFPGLQPLRPPIMGSVEPPRNFAPPMPLQFRPAVPAQQSQQFISQHYPPLGPGVP
LMNVGMPSQNQQPQFVQSIQQMPPRPGQQLPMSLPVARANMPIQSESMVPQSDSQTPNGY
TPGLGGSGLPLSSSYTYAPSSYGQVQNNFSATSQYQAVCQTQTLTVSSGEQLRASISTAS
GTSLLSSGEQPSILTIAPSATNFLPDSSRDGSTDWIEHTSANGRRFYYNKKTKVSSWEKP
FELMTPIERADASTNWKEYSSPDGRKYYYNKVTKESKWIIPEELKLAREQIGKVIVNGME
PVLNSHTQHSKSPTAVEATSIDNSSLTGQGEPSSPISVAPVVTMSSSNLHSEMTAGSSAS
PAVAPMNRTNVDEVEAPANTVTPSDSNMDETSVADVNTSRTPMKDAENVSSQDTLVSADG
VPAEDKEDAKKDTPGEKTNEVALETKAVEPEPLVYANKMEAKNVFKALLESANVGSDWTW
DRAMRVIINDKRYGALKSLGERKQVFNEFLNQKKKQEAEEKRMKLKKAREDFKKMLEEST
ELTSSTRWSKAVSLFENDDRFKAVERDRDRRDLFDSFMEELVNKERAKAQEERKRNILEY
RKFLEACDFIKASTQWRKVQDRLEADERCFRLEKIDRLEIFQDYLHDLEKEEEEQKKIHK
EELRKAERRNRDEFRKLMEEDIAMGTLTAKTHWRDYYVKVKDLPAYVAVASNTSGSTPKD
LFEDVSEELEKQYHEDKTRVKDAVKLGKITLSSTWTVEDFKTTILKDISSPPISDVNIKL
VFDELLERAREKEEKEAKKRKRLADDFFHLLYSIKDINASSKWEDFRSLIEDCQEFRSIG
DETYCKEIFEEYLAQLKEEAKESERKRKEEKQAKKEKEREDREKRKGKQRREKEKEEGHK
RDKADSDNMDTTEIQSSKETKRSEDDSRKQRKQHQSPEHVSHETDKERTKKSRGHSSDRK
KSSRHASGQESDSEVRHKKHKKDHRSSSHRDCDYGELEDGEFGDDGERW
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatcctcaatttcctggtttacagcctcttcggcctcctattatgggttca
gtggagccccctcggaattttgctcctcccatgcctcttcaattccgcccagcagttcct
gctcagcaatcacagcagttcatttcccaacattatccacctcttggccctggtgttccc
ctaatgaatgttggaatgccttctcaaaatcagcaaccccaatttgttcaatcaattcaa
caaatgcctccaagacctgggcagcagttaccgatgtcattgcctgttgctagggcgaat
atgccaattcaatctgaatcaatggtgcctcagtctgattctcaaacccctaatggttat
actccaggtttaggtggctctggtttacccctctcttcatcatatacgtatgcaccatct
tcttatggtcaagtacaaaataattttagtgccaccagccaatatcaagctgtttgtcaa
acccaaactcttactgtttcttctggggagcaactaagagcaagcataagcactgcctcg
ggtacctctcttctgagcagcggtgaacaaccatcaattctaactattgcaccttcagca
acaaatttcctgccagattcctcgagggatggatcaacagattggattgagcatacttct
gctaatggaaggagattttactacaataagaagactaaagtatccagctgggagaagcct
ttcgaattgatgacaccaattgagagggcggatgcatcaaccaactggaaagagtatagt
agtcctgatggaagaaagtattactacaacaaagtcaccaaggaatcaaaatggatcatc
cctgaagaactgaagttggcccgtgaacaaattggaaaggtcattgtcaatggaatggaa
cccgttctgaattctcacactcaacattcaaaatctcccactgcagttgaagcaacatca
attgataattcatctttaactggtcaaggagaaccatcaagtcccatttcagttgctcct
gttgttacaatgtcttccagtaatcttcattctgagatgactgctggatcatctgcctct
cctgctgtggctcctatgaacagaacaaatgtggatgaagttgaggcacctgcaaacact
gtcacgccatcagattctaacatggatgaaacatctgttgctgatgtcaatacttctaga
acaccaatgaaggatgcggagaatgtttcatctcaagatactctagtttctgctgatggg
gttccagcagaggataaggaagacgctaagaaagacacgccgggagagaaaacaaatgag
gttgctttggaaacaaaagccgttgagcctgaacctttagtgtatgccaataagatggag
gctaaaaatgtttttaaagcacttttggagtctgcaaatgttggatctgactggacttgg
gatcgggccatgagagtaataatcaatgacaaaaggtatggtgccttaaaatcactcgga
gagcggaagcaagtttttaatgagttcctaaatcagaagaaaaagcaggaagctgaggaa
aagcgcatgaaactgaaaaaggcacgggaggatttcaagaaaatgttagaagaatccaca
gagttgacatcatccacaagatggagcaaagcagtatctctgtttgaaaatgatgaccgt
ttcaaggctgtggaacgcgacagagacagaagggatctgtttgacagtttcatggaggaa
cttgtaaacaaggaacgagcaaaggcacaggaggagcggaagcgaaacatattggaatac
aggaagtttttagaagcttgtgactttattaaggctagcactcagtggcgaaaagttcaa
gaccgcttagaggctgatgaaagatgtttccgtcttgagaaaattgatcgcttagaaata
tttcaagactatttacatgacttagagaaggaagaggaagagcagaagaagatacataag
gaagaattgagaaaggcagaacgtagaaaccgtgatgagttccgcaaattgatggaagaa
gatattgccatgggcactctcacagcaaaaactcactggcgtgattattacgtgaaggtc
aaagatttacctgcttatgtggctgtggcttcaaacacctcaggttcaactccaaaagac
ttgtttgaagatgtttctgaagagcttgaaaaacaatatcatgaagacaagactcgtgta
aaagatgcagtgaagttggggaagatcacattgtcatcaacctggacagtagaagacttt
aaaacaaccatactaaaagatattagttctccacccatatctgatgttaacataaagcta
gtatttgatgagctactagaacgggcaagagagaaggaggagaaagaagctaagaagagg
aagcgtctcgcggatgatttctttcatttgctttattctatcaaggatattaacgcgtct
tcaaagtgggaggacttcagatcacttattgaagattgtcaagagttcagatcaatagga
gatgagacctactgcaaggaaatatttgaggagtaccttgcacagctgaaagaggaggca
aaggagagtgagcgaaagcggaaagaggaaaagcaggcaaaaaaggagaaggagagagag
gacagggaaaaaaggaaaggaaagcaaagaagggaaaaagagaaagaggagggtcataag
agggataaagctgatagtgacaatatggatacaactgaaattcaatcttccaaagaaacc
aaaagatctgaagatgatagtaggaaacaacgaaagcagcaccaaagtcctgagcacgtt
tctcatgaaactgacaaagagaggactaaaaaatctcgaggacatagcagcgatcgcaag
aaatcatcacggcatgcatctggtcaagaatcagacagtgaagtgcgacacaaaaaacac
aagaaagaccaccgtagtagttctcacagagattgtgattatggagagcttgaagacggg
gagtttggtgatgatggagaaagatggtag
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