Prosopis cineraria: 129292846
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Entry
129292846 CDS
T09047
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129292846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129292846
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129292846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
129292846
NCBI-ProteinID:
XP_054786483
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MLKPSLRGTSISSSSNGFCAERVGEGDLRNPRMDAHVEKDRSGKRAREDRDHSDRHRERD
HDRNRDHKHRSHDDDDKRHRDSDRHHHHRSDKDSKREHSHKSRRERSRELSYDSRDEREG
SRDGAHDRDGKRDWSHEPVNEREGSRERPKHRAMKREELYEERDSDHEFRSEREESVERV
HSSYSHKRKDREHTKDKDKDDREEKRTRVSEEGKERRRFEDRVEEGKKLNGEVREGRRER
RKFGDKVKKEEHLEDNEDGKHMKVKSGDIVKKEEDLEDNDNRKQVKDNEVKVKEEPKDQK
FDNAQGSANGNASVGNGFTLGSHASTSRSVPEASLVPNPSPSIKVSPISTTNENKGVSII
GSHEVTGKSSTDGSSSTTGKSGNISLDALAKAKKALQMQKELSEKLKKIPQLNKSSTKAE
GSTQLGFQDESKMPSVSAGVAAKTATPASAGPVANISNFPAAAAAAMPPTATDTAPAGIG
TLPNYEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDVAVPQKPTKAPVLRLDAQGR
EIDEHGNVVNVTKPSNLSTLKVNINKQKKDSFQILKPVLDVDPESNPHFDDRMGINKTKL
LRPKRMTFQFVEEGKWSKDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAAPDINPNLIEI
TERVVIKEKPKEQIPEIEWWDTLLLRSGNYGDIADGSISEDSIKMEKITIYVEHPRPIEP
PAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKERQEMIRQGVIEPPKPKVKISNLMKVLG
SEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAERREKKEKKLFDDPSTLETLVSV
YKINDLSHPKARFRVDVNAQENRLTGCAVISDGITVVVVEGGSKSIKRYGKLMLRRINWG
EFSKEDEENEESDDDKPENKCVLVWQGSVAKPSFNRFFVHECMTEAAARKIFADAGVGHY
WDLSVNYVEQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagccatccctgaggggtacgtccatatcttcatcttccaacggcttttgtgcg
gagcgtgtgggagagggggatctccgaaaccctagaatggacgcgcacgtagagaaggac
agatccggcaagagagcccgagaagatagagatcacagcgaccgccacagagaacgcgat
cacgatcgcaatcgagaccacaagcaccggagccacgacgacgatgacaagcgccatcgt
gattccgatcgtcatcaccatcatcgatccgacaaggattccaagcgcgagcactcgcac
aaatccaggcgtgaaagatcgcgcgagttgtcgtatgattccagggatgagcgagaagga
agcagggatggggctcacgatagggacgggaagcgtgattggtctcacgaacctgtaaat
gagagggagggaagcagagagaggccgaaacatcgggcgatgaagcgtgaggaattgtac
gaggagagggattcagaccatgaatttaggagtgagcgggaagagtcagtagagagagtg
cactcatcgtattcgcacaagaggaaagacagggaacacactaaagataaggataaggat
gatagggaggaaaagaggacaagggtttcagaagaggggaaggagaggaggagattcgag
gacagggttgaggagggcaagaagttgaatggtgaggtcagagaaggaaggagggagagg
aggaagtttggggataaggtgaagaaggaagagcatttggaagacaatgaagatgggaaa
cacatgaaggttaagtccggggatatagtgaagaaggaagaggatttggaagacaatgac
aataggaaacaagtgaaggataatgaggtgaaagtgaaggaagaacccaaggatcagaag
tttgacaatgcccagggttctgccaatggaaatgcttcagttggaaatgggtttaccctg
ggatctcatgctagcacttcaaggagtgtgcctgaagcatctctggttcctaatccttcc
ccttctatcaaggtatctccgatttctaccacaaatgaaaataagggcgttagtattatc
ggatctcatgaggttactggaaaatctagtacagatgggtcatcttcaactactggaaaa
agtggaaacatctctcttgatgccttagctaaagctaagaaagctttgcaaatgcagaag
gagttgtcagagaagctaaagaaaattccgcagttgaacaagagttctacaaaggctgaa
ggaagcacacaattaggttttcaggatgaatctaagatgccttctgttagtgctggagtg
gcagctaaaactgccacaccagcttctgcagggcctgttgcaaacatttctaattttcct
gcagctgcagctgctgcaatgccaccaactgcaaccgatactgctcctgctggtattggt
actctacctaactatgaagctgtgagacgtgcccaggagcttgctgccagaatgggtttt
cgtcaggatccacaatttgctcctctcataaacatgtttcctgggcagatggtaacagat
gttgctgtcccccagaaacctaccaaggcccctgttcttcgtcttgatgctcagggaagg
gaaatagatgaacatggaaatgttgttaatgtgactaagccaagcaaccttagcacactt
aaggtcaacatcaacaaacagaagaaagactcgttccaaatactcaagcctgttctggat
gttgatcctgagtctaatccccattttgatgacagaatgggcatcaacaaaacaaaactc
ttgaggcccaagaggatgacgttccagtttgtcgaggaaggaaaatggtcaaaagatgct
gaaacaattaaattgaagagtaaatttggagaagctcaagcaaaagaacacaaagcaaag
caagcgcaattggcaaaggctaaggcagcacctgatataaatccaaacttaattgaaata
acagaaagagtagtaatcaaagaaaaacccaaggagcaaattccagaaattgagtggtgg
gacacacttcttttgcgctctggaaattatggtgacattgctgatgggtccataagtgag
gatagtataaagatggaaaaaatcaccatttatgttgagcatcctcgtccaattgaacca
cctgctgagcctgctccccctccgcctcaacctctaaagttaacaaagaaagaacaaaag
aaactccgtactcagagacgtttggctaaggagaaagagcggcaagagatgataagacag
ggtgtcatagaaccccccaagccaaaagtgaagataagcaatttaatgaaagtacttggc
tctgaggcaactcaggatcctaccaggcttgaaaaggaagttcgtagtgctgctgctgag
cgtgagcaggctcacatagacaggaatattgctcgcaagctcactcctgctgagcgcagg
gaaaagaaggagaagaaactttttgatgacccaagtactctggagacccttgtctcagtt
tacaagatcaatgacctttcacatcctaaagcccgcttcagagttgatgtcaatgctcaa
gagaaccgtttgactgggtgtgctgtaatctctgatggtattactgttgtagtggttgaa
ggtgggagcaagtcaattaagaggtatgggaaacttatgcttagacgcataaattggggt
gaattttccaaagaagatgaagaaaatgaagaatctgatgatgataaacccgagaataag
tgtgttctagtgtggcaagggagtgttgctaagccaagtttcaacagatttttcgtccat
gaatgcatgaccgaagcagccgcccgcaagatttttgctgatgctggtgttggccactac
tgggacctttcggtcaactatgtagagcaatag
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