Prosopis cineraria: 129292848
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Entry
129292848 CDS
T09047
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
pcin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129292848
03083 Polycomb repressive complex
129292848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129292848
Enzymes [BR:
pcin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129292848
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
129292848
HDAC complexes
Sin3A-HDAC complex
129292848
BRAF-HDAC complex
129292848
REST complex
129292848
SHIP complex
129292848
MiDAC complex
129292848
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
129292848
Heterochromatin formation proteins
Other heterochromatin formation proteins
129292848
Chromatin remodeling factors
NuRD complex
129292848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129292848
NCBI-ProteinID:
XP_054786485
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MDAGGNSLPSAPDGMKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAIKLNHDQCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGLEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHHLLDEIRSKLLDYLSKLQHAPSVQFQERPPDSDLGEADEDRDDGDGQWDPDSEMDI
DDEREQPSSKVKREMVEPHLNDLEGQTRTGEQFRGAESGGAETACLKVNVIT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatgctggaggaaattctctgccgtctgctccagatgggatgaagagaaaagtctgc
tatttctatgatcctgaggttggaaattactattatgggcaaggtcaccctatgaagcca
catcgtattcgaatgacacacgctcttcttgcccactatgggttgcttcagcacatgcag
gtccttaagccgtttcctgccagagacagagatctttgccgatttcacgctgatgactat
gtttcattccttcgaagcataactcctgaaacacagcaggatcaacttaggcagctcaag
cgctttaatgttggtgaagattgccctgtctttgatggtctttactctttctgtcaaact
tatgctggaggttcagttggtggtgctattaagttgaatcatgaccaatgtgatattgct
atcaattgggctggtgggctacatcatgccaaaaagtgtgaggcttctggattttgctac
gtcaatgatatagtcctggcaattttggaacttcttaaacagcatgagcgtgttctatat
gtggacattgatatccaccatggtgatggggtggaggaagctttctacactactgacaga
gtcatgactgtttccttccataaatttggtgattattttcctggtacaggagacatacgt
gatattggatatggaaaggggaaatactactctctgaatgttccactggatgatgggatt
gatgatgagagttatcatttcttattcaaaccaataattggcaaggtgatggaagttttt
aggcctggtgcagtagttctccagtgtggtgctgattccttgtctggagacagattggga
tgctttaatctttcaattagaggtcatgcagagtgtgtcagatacatgagatcatttaat
gtgcccctcttgctgttgggtggtggtggttataccattaggaatgtcgctcgatgctgg
tgctatgagacaggagttgctcttggattagaagttgatgacaaaatgccacagcatgag
tattatgagtattttggccccgattatactcttcatgttgctccaagcaacatggaaaac
aagaattctcatcatttattagatgaaatacgttccaagcttctcgattatctttccaag
ctgcaacatgctcctagtgtccaatttcaggaaagacctcctgattctgatcttggagag
gctgatgaagatcgcgatgatggagatgggcaatgggatccagactctgaaatggacatt
gatgatgaacgtgaacaaccctcaagcaaagtaaagcgagagatggtggaacctcacctc
aatgatttggagggccagacaagaactggagagcaatttagaggcgccgagtctggaggg
gctgaaacagcatgcttaaaggtgaatgtaatcacataa
DBGET
integrated database retrieval system