Prosopis cineraria: 129292892
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Entry
129292892 CDS
T09047
Name
(RefSeq) protein STABILIZED1-like isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129292892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129292892
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129292892
Complex C
U5 SnRNP specific factors
129292892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
ubiquitin
IgD_del_linker
PMC2NT
Motif
Other DBs
NCBI-GeneID:
129292892
NCBI-ProteinID:
XP_054786544
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MVFIVPPSHKTLSLDVDPKTTSLHALKLAVQQISDTPISHQRLFLSQSLRLLGDYDSVLI
SDLGIRPYSTLTLHVPFLGGTQPPVPPKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSASTIGGAAPAAGRGGGRGGEDEEDDEGDDKGYDENQKFDEFEGNDVGL
FASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRK
LYTISAQEWDSIPEIGDYSLRNKKKKFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGG
TETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAE
ISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQRGCEECPKNEDVWL
EACRLANPEDAKAVIAKGVKSIPNSVKLWMQAAKLEHDDVNKSRALRKGLEHIPDSVRLW
KAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNARKVLNRARERLPKEPAIW
ITAAKLEEANGNTSMVGKIIERGIRALQREGLTIDREAWMKEAEAAERAGSVATCQAIIR
NTIAIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEKSH
GTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLA
AFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIDEERRLLDEGLNLFPS
FFKLWLMLGQLEERLAQASKQHEKHEEHLEHLKEAKKIYESGLKNCPNCIPLWLSLAKLE
EEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGNKKEADILMAKALQECPNSGIL
WAMSIEMVPRPQRKSKSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPD
IGDFWAWNYKFELQHGAEENQKEVLKRCVAAEPKHGEKWQSISKAVENSHHPTEAILKKV
VVLLGKEENAAENEATAALTKRYADGSLPIEDFNVEVEDQSGQKCSEVLRLIRVMMGLML
HANGNLLIRQKNYNDALVVLSVGEEAFSLCDTKVVELSEARKRLEMARIEIDHAHIKDFQ
CLRLLQGGFYLELAL
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcattgtgccgcccagccacaaaactctatccctagatgttgacccaaagacg
acctctctccatgccttaaagcttgctgtccagcaaatttccgacacacccatatcccac
caacgtttattcctttctcagagtctccgattgctcggcgattatgattccgttcttatc
tccgatctcggaattcgaccttactccactttaactcttcacgttcccttccttggtgga
actcaacctcctgtccctcccaaacctcgatttgatttccttaactccaagcctccccct
aattatgttgctggtcttggacgtggggccactggattcaccacccgttctgacataggg
cctgcccgtgccgctcctgacctaccggataggtcggcgagcaccattggcggtgctgcc
cctgcagctggccggggaggagggaggggaggtgaagacgaggaagatgatgaaggggat
gataaagggtacgatgagaatcaaaagtttgatgagtttgaagggaatgatgtggggttg
tttgcttctgccgagtacgatgaggatgataaggaggccgatgctgtgtgggaagccatt
gacaagagaatggattcaaggaggaaggataggagagaagcaaggttgaagcaggagatt
gagaagtatcgggcgtccaaccccaagatcactgagcagtttgcggatttgaaacgtaaa
ttgtataccatttctgcacaagagtgggatagtataccggagattggggattattctttg
aggaataagaagaagaaatttgagagttttgttccggtgcctgatacgcttcttgagaag
gcaagacaggagcaagaacatgttacagcattggatcccaagagtagagcagctggggga
accgaaactccatgggcgcaaacaccagttacagatttaactgcagttggtgagggtaga
ggcactgtgttgtctttgaagctggatagactctcagattcagtttcagggttgacagtt
gtggatccgaaggggtatctgactgatcttaagagtatgaaaataacaagtgatgcagaa
atttcagatatcaagaaggctaggttgctacttaagagtgttacccagacaaatcctaaa
caccctcctggttggattgcggctgcaaggttggaagaagtagctggcaagattcaggca
gcaaggcagttgattcagagaggttgtgaggagtgtcccaagaatgaagatgtgtggttg
gaggcttgtaggctggcaaatccggaagatgccaaggctgttattgctaagggtgtcaaa
tcgatccctaattctgtgaagctgtggatgcaagctgcaaagttggaacatgatgatgtg
aacaagagtagggcattgaggaaggggttagagcacattcctgattctgttaggctgtgg
aaggcggttgtggagcttgctaatgaagaagatgcaaggctcttgcttcacagagctgtg
gaatgttgtccattgcatgttgaattgtggctagcacttgcaaggttggaaacttatgat
aatgctaggaaggttcttaatagggcaagagagaggttaccaaaggagccagccatatgg
ataacagctgcaaagttagaagaagcaaatggcaatacttccatggttggtaaaattatt
gaaagaggtataagggctttgcaaagagaaggtttgactatagatagggaagcttggatg
aaggaagctgaggctgcagaacgtgcaggatcagttgcaacttgccaggctataattcga
aatacaattgcaattggagtggaagaagaagatagaaagaggacatgggttgctgatgca
gaagagtgcaagaaaaggggttctattgagacagcaagagctatatatgctcatgccctt
actgtcttcttaactaagaagagcatatggctcaaagcagctcagcttgaaaaaagtcac
ggaactagggaatctcttgatgctttacttcgtaaagcagttacatacagaccacaggct
gaagttctttggcttatgggtgcgaaagagaaatggcttgctggggatgtgcctgcggct
cgtgcaatcctccaagaagcttatgctgccattcccaattctgaggaaatatggttagct
gctttcaagctggaatttgaaaaccatgaacctgagagagctagaatgctgttggccaaa
gctcgtgagagaggaggtacagaaagagtatggatgaaatccgcaattgttgagagagaa
ctgggaaatattgatgaggaaagaaggttgttagatgaagggctaaatcttttcccttca
ttcttcaagttgtggctgatgcttggtcagcttgaggaacgacttgctcaggcttctaaa
cagcatgaaaagcatgaggaacatcttgagcacttgaaggaagctaagaaaatttatgag
tctggactgaaaaactgtcctaattgtattcctctatggctctctcttgcaaaacttgaa
gaggagatgaatggactgagtaaagctcgtgcagttctaaccatggctcggaagaaaaat
cctcaaaaccctgaactctggctggctgctgttagagcagaattgaagcatggaaataag
aaggaagctgatattttgatggcaaaagcactgcaagagtgtccaaacagtggtattttg
tgggcaatgtcaattgagatggttcctcgcccccaacgtaaaagtaagagtatggatgcc
ctcaaaaaatgtgatcatgatcctcatgtcatcgctgctgtggcaaaattattctggcat
gacaggaaggtggacaaagctagaacttggctgaacagggctgtgactctggcacctgat
attggggatttctgggcatggaactataaatttgaacttcaacatggagctgaggagaac
cagaaggaagtattgaaaaggtgtgttgctgctgaaccaaaacatggtgagaaatggcag
tccatctcgaaagcagtggagaactctcaccatccaacagaagccattttgaagaaagtt
gtggttttgcttgggaaggaagagaatgcggctgagaatgaagctaccgcagcactgacc
aaaaggtatgctgatggttcattacctatagaagacttcaacgtagaagttgaagatcaa
agcggacaaaagtgcagtgaggttcttagactgatcagagtaatgatgggactgatgctt
catgcaaatggaaatcttcttattagacagaaaaactacaatgatgctttagttgtgctc
tctgtgggtgaggaggcattttctctttgtgatacaaaggttgttgagctatcagaggct
cgaaagcgtctagaaatggctagaattgagattgatcatgctcacataaaggatttccaa
tgccttcgacttctacagggaggtttctatcttgaacttgcattgtga
DBGET
integrated database retrieval system
