Prosopis cineraria: 129292959
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Entry
129292959 CDS
T09047
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pcin
Prosopis cineraria
Pathway
pcin03030
DNA replication
pcin03420
Nucleotide excision repair
pcin03430
Mismatch repair
pcin03440
Homologous recombination
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129292959
03420 Nucleotide excision repair
129292959
03430 Mismatch repair
129292959
03440 Homologous recombination
129292959
03460 Fanconi anemia pathway
129292959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129292959
03032 DNA replication proteins [BR:
pcin03032
]
129292959
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129292959
Transcription factors [BR:
pcin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129292959
DNA replication proteins [BR:
pcin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129292959
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129292959
MMR (mismatch excision repair)
129292959
DSBR (double strand breaks repair)
HR (homologous recombination)
129292959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
TMEM219
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
129292959
NCBI-ProteinID:
XP_054786686
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MPVNLTPNAIAAIVAGDVNSKPLVQVLDIKLISNNTQQERYRLLISDSASTQHAMLATQL
NDRVRTGRVKKGSVVQLIDYVCSQIQNRKIIVVLNMETIIPDCEIIGNLNSFVESDSIAH
KALSSNNMQNPSRFNNNSLSAQNSSHDGQNFRPTVQPPFQPPPVYKNQGAIMKNEAPARI
IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAIVD
RFYDAIEVGKVYLISKGSLKPAQKNFNHLKNDWEIFLDSISTVELCPDEDASIPRQQFSF
RPISDIQNVDSNCILDVIAVVTSVNPSVPILRKNGMETQRRILNVKDMSGRSVELTLWGD
FCNREGQKLQEMVDGGFFPVLAVKSGRVNDFSGKSIGTISSTQLFINPDFPEAHRLRDWF
DQGGKDSASLSISKDISPGGLKNEIRKTVSQIKDEGLGRSDKPDWITVRATISYIKADTF
CYTACPLMIGDRQCSKKVTRSGATRWKCDRCNQEFEECDYRYLLQAQIMDHTGITWVTAF
QESGEEILGCSAKELYLLKYEEQDDEKFERIIRSKLYNQFVFRLKVKEELYGDEQRVKIT
VVKADKVDYSSESRYMLDLISKFCKQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctaacgcccaacgcgatcgcggcgattgtcgccggcgacgtgaactcg
aagccgcttgtccaggtcctggacatcaagttgatttctaataatacgcagcaggagagg
taccggcttctgatttccgattccgcttccactcagcacgctatgctcgcgactcagctc
aacgaccgagttagaaccggacgagttaagaaaggttccgttgttcagctgattgactat
gtttgcagtcaaattcagaaccgcaagatcattgtagtgctcaacatggaaactataatt
ccagattgtgagattatcgggaatttaaactcatttgtggaatctgattcaatagctcat
aaagcattgtctagtaacaatatgcagaacccatccaggtttaataacaatagtctgtct
gctcaaaattctagtcatgatgggcagaatttcaggccaactgttcaacctccattccaa
ccaccaccagtttacaaaaatcaaggtgcaattatgaagaatgaagcacctgcacgaata
attcctattgctgctttaaatccttatcaaggtcggtgggctatcaaggcaagagtaact
gcaaaaggggatctccgccgctataataatgctcgaggagatggaaaagttttctctttt
gatctccttgactctgatggaggtgaaatacgagtaacttgcttcaatgctattgttgat
cgattttatgatgcaattgaggttggtaaagtttacttgatatccaaaggtagcttaaaa
cctgcgcagaagaacttcaatcatttgaagaatgactgggaaatttttctagactctatt
tcaactgtggagctttgcccagatgaagatgcttcaatacccagacaacagttctccttt
aggcctatcagtgacattcagaatgttgacagtaactgcatacttgatgttattgcggtt
gtgacatcagtaaatccctcggttcccatcttgaggaagaatggaatggaaactcagaga
cgaattctgaatgtaaaagacatgtctggcaggagtgttgagctaaccctttggggtgat
ttctgcaatagggaaggtcaaaagctccaagagatggttgatggtggttttttcccggtt
ctggcagtcaaatctgggagggttaatgactttagtggaaaatctataggaacaatttct
tccacccaactgttcattaatccagattttcctgaggctcatagattaagagactggttt
gaccaaggggggaaagattcagcttctttgtccatttctaaggacatttcacctggagga
cttaagaacgagatacgtaaaactgtgtctcagatcaaggatgaaggccttggccgatca
gataagccagactggataacggtgagggcaaccatctcttacatcaaggcagatacattc
tgttacacggcttgcccactgatgattggagaccgacagtgcagcaaaaaagtgactagg
tccggagccactaggtggaaatgcgatagatgcaatcaagagtttgaggagtgtgattac
cgctaccttcttcaagcccaaattatggatcatacgggaataacttgggtcacagcattc
caagaatcaggcgaggaaatcttgggttgctcagcgaaggagctgtacttattgaagtat
gaagagcaggatgatgagaagtttgaacgcataatccgtagtaaactctacaaccagttt
gtgtttcggctgaaagtgaaggaggaattgtatggtgatgaacagagggttaagattacc
gtggttaaggcagataaggtggattattcttcagagagtagatacatgttagatttgatt
tcaaaattttgtaagcagtaa
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