Prosopis cineraria: 129293215
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Entry
129293215 CDS
T09047
Name
(RefSeq) squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00100
Steroid biosynthesis
pcin00909
Sesquiterpenoid and triterpenoid biosynthesis
pcin01100
Metabolic pathways
pcin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129293215
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
129293215
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcin01006
]
129293215
Enzymes [BR:
pcin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129293215
Prenyltransferases [BR:
pcin01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129293215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
129293215
NCBI-ProteinID:
XP_054787011
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MGSLGAILRHPDDFYSLVKLQMAVRHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTGIATDVKVPILKAFHHHIYDRDWHFSCGTKEYKILMD
QFHHVSNAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFYASGLEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYANKL
EDLKEEDNSVKAVQCLNDMVTNALMHVEHSLQYMSNLRDLAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCMLESKVDKNDPNAAKTLSRV
EAIQKACRESGLLSKRKSYILKSEPGYNSATFLILMVALALIFSYLSTNRDNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggcgctattttgaggcatcctgatgacttttactcgcttgtgaagctc
caaatggcggtcaggcacgcagagaagcagatccctccagagccacactggggcttctgc
tatagcatgcttcataaggtgtctcgtagttttgctctcgtcattcagcagctcggaacc
gagcttcgaaacgctgtttgcatattttatttggtccttcgagcccttgatactgttgag
gacgatactggcatagctacagatgtcaaggtgccaatattaaaagcttttcatcatcac
atatatgatcgtgattggcatttttcatgtgggacaaaggagtacaaaatcttaatggac
cagtttcatcatgtttcgaatgcatttctggaacttggaaagaactatcaggaagcaatt
gaggatattaccaaaaggatgggagctggaatggccaaatttatttgcaaggaggtggaa
acaattgacgactatgatgaatattgtcactatgtagctggactcgttgggctgggttta
tctaagcttttctatgcatctggtttggaagatttggctccagacgacctctctaattca
atgggtttgttccttcagaaaacaaatattatccgagattacctggaagacatcaatgag
atcccaaagtcacgcatgttttggcctcgggagatctggagtaaatatgctaacaaactt
gaggacttgaaagaagaagacaattctgtcaaggcagtgcaatgcctcaacgacatggtt
accaatgctttgatgcatgttgaacatagcttacaatacatgtctaacttacgagactta
gctatatttcgtttttgtgccattcctcagatcatggccattgggactcttgcattatgc
tacaacaacatcgaagtcttcagaggtgtagttaaaatgaggcgtggtctaactgccaag
gtgattgatcggacaaagacaatgtcagatgtctatggtgctttctttgacttttcttgt
atgttggagtctaaggttgacaaaaatgatcccaatgcagcaaaaacattgagcagggtg
gaagctatacaaaaggcttgtagagaatctggtctgcttagtaaaaggaaatcttatatt
ttgaagagtgaacctggatataactcagccacgtttctaatacttatggtcgcgctggct
ctcattttctcatatctctccaccaaccgggacaacaattga
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