Prosopis cineraria: 129293422
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Entry
129293422 CDS
T09047
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129293422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129293422
Spliceosome [BR:
pcin03041
]
Common components
Common spliceosomal components
SR proteins
129293422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
129293422
NCBI-ProteinID:
XP_054787349
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MRSIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRAEF
GRKGRRLRVEWTKHERGIRRPGSSRRSSANSRPSKTLFVINFDTYHTRTRDLERHFEPYG
KIVSVRIRRNFAFVQYESCDDAIRALEATNMSKLLDRVITVEYAVENDDDRRNAHSPDRS
HDRPRDISYDRKRSPSPYHRERGSPDYGRGSSPYRRERSSPDYGHSRSRSSQQIERGSPD
YNQRSRSPYGRERDGSDPVHGSSHSPHHKERARSDRGNSHSHSPNGRERVSPQNGSSDHS
PLYAKRASPENGHGSISSPDARGDGSPYNGDEGDQSSMPEPKDNTIDGAPESPMNETYRS
HSPAAEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctatcttttgcggaaactttgaatatgatgctcggcagtctgatctggagcgg
ctttttagaagatatgggaaggttgatagggtggatatgaagtctgggtttgccttcatc
tatatggaagatgagagagatgctgaggatgcaattcgtgcacttgatcgggcagaattt
ggtcggaagggacgaagacttcgtgtggaatggacaaaacatgaacgtggcattagaagg
cctggtagttcaagaagatcttcggcaaattcaaggccatcaaagactttatttgttatt
aattttgatacatatcacaccaggactagggatttggagaggcactttgagccatatggc
aagatagttagtgtgaggattagaaggaattttgcatttgtccagtatgaatcatgtgat
gatgccatcagagcattggaagctacaaatatgagcaagttactggatcgagttatcaca
gttgaatatgctgtagagaatgatgatgacaggaggaatgcacatagtcctgatagaagc
catgatcgtccacgtgatataagctatgatagaaagcgatcgcccagtccttatcaccga
gaaagaggcagccctgattatggtcgtggctctagtccatatagaagagagaggagcagc
cctgactatggtcatagccgtagtcgaagttcccaacagattgagagaggtagccctgat
tataatcagaggagccgtagtccatatggaagagagagggatggttctgaccctgttcat
ggctctagccatagtcctcatcataaagaacgggccagaagtgaccgtggcaattctcac
tcccatagtcctaatggaagagagagggtaagccctcaaaatggcagttctgaccacagt
cctctctatgcaaagagggctagccctgaaaatggtcacggctctataagtagtcctgat
gcaagaggcgatggcagtccttacaatggtgatgaaggtgaccaaagttccatgcctgag
cccaaggacaacactattgatggtgctcctgaaagccccatgaatgaaacataccgcagc
cattctcctgctgctgaagaatga
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