Prosopis cineraria: 129294109
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Entry
129294109 CDS
T09047
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129294109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129294109
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129294109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
129294109
NCBI-ProteinID:
XP_054788217
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MIGKENLMTEDLNLCFEQLMMVAGGGNRGNSRAKMEAGVITEWKDIPVELLMQILALADN
RTVIAASGVCRGWRDAICFALSRLSLSWCSKNMNNLVLSLVPKFTKLQILVLRQDKPQLE
DNAVETISNCCHDLQMLDLSKSFKLTDRSLYALAHGCRDLTNLNISGCSAFNDVALAYLA
SLCRKLKCLNLCGCVQAASDPALQALGRYCNLLQSLNLGWCENVGDDGVTSLAAGCPDLR
TLDLCGCVRITDESVIALANGCPHLRSLGLYYCQNITDRAMYSLAHSKVNNRMWGSVKGI
TEEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVHCACAVHS
HRAVASLPYQAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattggcaaggagaacttgatgacggaggacttgaacttatgctttgagcaacttatg
atggttgcaggcggtggtaacaggggaaacagtagagcgaaaatggaagccggggtgatc
accgagtggaaggatattccggtggagcttttgatgcagattctggcccttgctgataat
cggacggtgatcgcagcttcaggagtctgccgtggatggagagatgctatatgcttcgcc
ctttcccgtttatcactctcatggtgtagcaagaacatgaataacttggtcttatcgctt
gtgcctaaatttacaaaattgcaaattttagtccttcgccaagacaaacctcaactagag
gataatgcagttgagactatctcaaattgctgtcacgacctgcagatgctagacctcagc
aaaagtttcaagcttactgatcgctctctgtatgccttagcccatggatgccgtgatctt
acaaatctaaatataagtgggtgctcagcatttaatgatgtggctctggcttacctagcc
agtctctgcaggaaattgaagtgtttaaatctttgtggatgtgttcaagcagcatcagac
cctgcattacaggctttaggacgttactgcaacctattacaatctttgaaccttggatgg
tgtgaaaatgttggtgatgatggagtgacaagtttagcagctggttgccctgatcttaga
acacttgacttgtgtgggtgtgtccgtataacagatgagagtgtgattgctttggcaaat
gggtgtccccatctgagatcccttgggctgtactactgtcaaaatatcacagacagagca
atgtattcattggcccatagcaaagtgaataacaggatgtggggatctgtgaaaggaatt
actgaagaggatgggctaagaactctcaacattagccaatgcacagcactcacaccctct
gctgttcaagccgtgtgtgactcgttcccggcattgcacacctgctccggcaggcattca
ctcatcatgagtggctgcttgaacctgacttctgtgcactgtgcttgtgctgtgcactca
catcgagcggtcgcctctctcccatatcaagctcattga
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