Prosopis cineraria: 129294413
Help
Entry
129294413 CDS
T09047
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129294413
Transcription machinery [BR:
pcin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
129294413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
129294413
NCBI-ProteinID:
XP_054788740
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MNFGFRLNLSGCSVPAHSPHSFTSSPIRLSSSSAGGREASFNPTRLSWLSTIYEERETFQ
NDFRRASSCSSSVLETLHDDCLEDGEIKVNKGKKSLNSVHEMIDNTQMPFGKETFTTSTS
FQSFKASHFRLLMENLDVLEETFSDSEVLRLEKDIMMQLGKLGALEFFNSRLSGSFETSR
FLDFCDKHPEQVCEHKTNGKADYHLGKVVVRSRRKENKPRRKGALTSSKVLSQPLPSGPI
EDGLLGLPASSVKRTLNNRNRRAIVAKKEAEMSTAVKVLIGLERIKAAMEEDTTEVVTLR
SWAEAAGVDEKRLWQHLHYGLYCRDELIRSTRSLVLYLAKKYKGMGIASEDLLQAGYVGV
LQGAERFDSTRGYKFSTYVQYWIRKSMSRMVARYARGILIPWSLSKAINQIQKAQKSLKS
TAMQYSDDYEIAKITGLSVDKIRSAHNCLRVVGSINQKIGDCFSVKYMELVPDASVGSPE
EAVMKQQMRKHMHDLLNDLEPREKQVLALRFGLNDHQPRSLEEIGRLFQGRLCRLCPLFQ
IEVASQSPGEWGHCMILEYTLYRRKPHRQNSSVNNISCGFLYTPENTLWRLFYYII
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggttttaggctaaatctcagcggttgtagtgttcctgctcattctcctcat
tctttcacttcttcaccaatcaggctttcttcgtcttctgctggaggcagggaagcttct
ttcaatcccacgaggttatcttggctgtcaaccatttatgaggaaagagaaactttccaa
aatgattttcgaagggcatccagttgttcatcttcagttttggaaaccctacatgatgat
tgtttggaagatggagaaatcaaggtgaacaaaggaaagaaatctttgaatagtgttcat
gaaatgattgataatacccaaatgccttttgggaaggagacatttacaacttctacaagc
ttccagtcattcaaggcatcacattttcgtttgctaatggaaaacctagatgttttagaa
gaaactttttctgattctgaagtgctaaggttggagaaagatatcatgatgcaactagga
aagcttggagctctagagtttttcaattctcgtctgtcaggatcttttgaaacctcacgt
tttttggatttctgtgacaaacatcctgagcaagtttgtgagcataagacaaatggcaag
gcagattaccacttgggtaaagttgttgtccgatctaggagaaaagaaaataaaccaaga
aggaagggagcattaacttcctcgaaggttttatctcaaccattgccttcaggacctatt
gaggacggtctcttaggcctaccagcttcatctgtaaaaagaacattgaataatagaaac
aggagagcaatagttgctaaaaaggaagcggaaatgtcaacagcagtaaaggttctgata
gggttggagagaattaaagcagcaatggaagaggataccactgaagtagtaaccttaagg
agctgggcagaagcagctggagttgatgagaagaggctgtggcagcatctgcattatggc
ctttattgtcgagatgagcttataaggagtactcgatccttagttctataccttgccaag
aaatacaagggaatgggaatcgcatcagaagatttacttcaggcaggatacgtgggtgtt
ctccaaggtgcagagagatttgatagtacaagaggctacaaattctcaacctatgtgcag
tattggataaggaaatcgatgtcaagaatggttgcgcgatatgcccggggaatcttaatt
ccttggtcattgagcaaggcaataaatcagatacagaaagcacaaaaatccctgaaaagt
actgcgatgcaatactcagatgattatgaaatcgcaaagataacaggtctttccgtggat
aaaatcagatcagctcacaattgcctgagagtagtcggttcaattaatcagaagataggg
gactgctttagtgtaaaatacatggaactcgtccccgatgcgtcagtagggagccctgaa
gaagctgtcatgaagcagcagatgagaaaacacatgcatgatcttctgaatgacttggaa
ccaagggaaaagcaagtgctagctctacgctttggtcttaatgatcaccagcccaggtct
cttgaggaaattgggaggcttttccaaggacgactttgtagactctgtccgctgttccaa
attgaagtagcatcacaatcgcctggagagtggggacactgtatgatactcgaatatact
ctgtacagaagaaagcctcatcgccaaaatagcagcgtaaataatatttcttgtggtttt
ttgtacacccctgaaaacacgttatggcgtttattctattatattatatag
DBGET
integrated database retrieval system
