Prosopis cineraria: 129297610
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Entry
129297610 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
pcin
Prosopis cineraria
Pathway
pcin03030
DNA replication
pcin03420
Nucleotide excision repair
pcin03430
Mismatch repair
pcin03440
Homologous recombination
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129297610
03420 Nucleotide excision repair
129297610
03430 Mismatch repair
129297610
03440 Homologous recombination
129297610
03460 Fanconi anemia pathway
129297610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129297610
03032 DNA replication proteins [BR:
pcin03032
]
129297610
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129297610
Transcription factors [BR:
pcin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129297610
DNA replication proteins [BR:
pcin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129297610
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129297610
MMR (mismatch excision repair)
129297610
DSBR (double strand breaks repair)
HR (homologous recombination)
129297610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
NGO_1070-like
zf-CCHC_3
DUF223
zf-CCHC_5
DUF936
Motif
Other DBs
NCBI-GeneID:
129297610
NCBI-ProteinID:
XP_054791912
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAANLTGGAIITMCRDDFSCEDLKPVLQVIDLKLVQSQQHNNTERYRLVLSDGSHYQQGM
LATQKNELVHAGRLQKGSVVKLTQFICNVVQSRKIIIIIELDMVLDRCDLIGEPVAAPRA
APASSSTDQSGANTGNPQSLTSTSPAGGNIARPNVTGPSLDHSQINHNNNGARYGAANAP
PSLPKTEPRATPTLPKSGPSSGSYGEHNMGFCNPRPETPRPPQNAYIHPPQPMHRQPSPI
YNNRGPISRNEALPRIIPIAALNPYQNMWTIKARVTSKASLRQYNNARGDGKVFSFDLLD
SDGGEIRATCFNAVAEQFYRLVEVGKVYLISRGSIKPAQKNFNHLPNDQELTLDLTSIIQ
PCLDDDKSIPMRLFNFRPISDVESMEISSVVDVIGVVFSVSPTTSIMRKNGTETQKRALQ
LKDMSGCSVELTLWGDFCSAEGQRLQNTCDSGAFPVLAVKAARVNEFNGKALGTIVNSQL
FIDPDFPEAYRLKEWFDKEGRNVPTISISRESFNAGKNDMRKTISQIKDEKLGTSEKPDW
ISICASVSFIKADSFCYTACPIMIGDRKCSKKVSNNGDGKWRCDRCDQYVDACEYRYILQ
LQIQDHTGLTWVTAFQECGEEIMGLPAKDLYYMKYEDQDDERFAQVIRKVLFTKYIFKLK
VKEETFGDEQRVKSTVVKAEKVNFSSESRFLLDLIDKLKAEKVEGINPHSLISNTGHQSV
GTGLANATSYNPINSNSGASREYGMPANQVGQYEHQYRSSFASAGSSSSFMPCSNCGGSG
HSSMHCPNIASLPRQSMGGGAFANRVSSGAGVSVATGECFKCHQTGHWARDCPGLNVAAP
SAYGSSVVHGGHGFVQRQQLGGF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaatctcactggcggggcgataataacaatgtgcagagacgatttctcttgc
gaggacctgaagcctgtgcttcaagtaattgacctgaagttggtgcagtcgcagcagcat
aacaacacggagaggtataggcttgtgctttcagacggttcccattatcagcaagggatg
ctcgctactcagaagaacgagttggtccatgctgggcggttgcagaagggctctgttgtt
aagttgactcagtttatttgtaatgttgtacagagtcgcaagattattatcatcattgag
ctggatatggtacttgacagatgtgatctgattggagaacctgttgctgcgccaagagct
gcacctgcatcatcttccactgatcagtctggagctaacacaggaaatcctcagtcttta
accagtacttcacctgcaggtggcaacattgctagaccgaatgtgactgggccatctcta
gatcattcacaaatcaatcacaataacaatggtgcaagatatggtgctgcaaatgcccct
ccttcattgcctaaaacagagcctagagctacacctactttaccaaaatcagggccatca
agtgggtcctatggtgaacataacatgggattttgcaatcctcgaccggaaactccaaga
cccccacaaaatgcctatattcatccaccacagcctatgcatagacagccatctccaatt
tacaataacaggggaccaatatccagaaatgaagctttgccaaggataattccaatagct
gcattgaacccataccaaaacatgtggacaattaaggctagagttacatcaaaggcaagc
ctcaggcagtacaacaatgccagaggtgatggcaaagtgttttcttttgatcttcttgac
tctgatggtggagaaattcgtgcaacttgctttaatgcagtggctgaacagttctatcgt
ctagttgaagttggtaaagtatatctgatttccagggggagtataaagccggctcaaaaa
aattttaatcatcttcctaatgatcaagaactgacccttgatctgacatccatcatacag
ccatgccttgatgatgacaaatcaattccaatgcgtctttttaattttcgtccaattagt
gatgttgaaagcatggaaatttcgagtgttgtggatgtgattggtgtggtattttctgtc
agtcctacaacctcaatcatgagaaaaaatggtactgaaactcagaagagagccctccag
ttgaaggacatgtctggctgtagtgttgaattaaccctatggggagatttttgtagtgca
gaaggacaacggttgcagaatacttgtgactcaggtgcatttccagttttggctgtgaaa
gctgccagggtaaatgaattcaatgggaaggcccttgggaccatagtcaatagtcagcta
tttatagatcctgattttcctgaggcttacaggttgaaagaatggtttgacaaggaaggg
aggaacgtaccaactatttctatttccagagaatcattcaatgctggtaagaatgatatg
aggaagactatatctcagattaaagatgagaagttagggacttcagagaagcctgattgg
attagcatctgtgcaagtgtttcattcattaaggccgactcattctgctatacagcctgt
cccatcatgataggtgataggaaatgtagcaaaaaggtgtccaataatggagacggaaag
tggaggtgtgatagatgtgaccagtatgttgatgcatgtgaatataggtatatactgcaa
ctccaaatacaggaccacactgggctaacatgggtaactgcatttcaggagtgtggtgag
gagataatgggcttacctgccaaagatctttattatatgaaatatgaagatcaggacgat
gaaagatttgcacaagtcatccgtaaggttctttttactaaatacatattcaagttaaaa
gttaaggaagagacatttggtgatgaacaacgtgtgaagtcaacagtggtgaaagcagag
aaggttaacttttcatctgaatcaagatttcttttggatttgattgataagcttaaagct
gaaaaggtagaaggtatcaatcctcattctctaatcagtaatactggacatcagagtgtt
ggaactggcctggccaatgccaccagctataatcctataaatagcaacagtggtgcgagt
agagaatatgggatgccagcaaatcaagtgggtcagtatgagcaccaatataggagttct
tttgcttcagctgggtcttctagttcatttatgccttgcagcaattgtggaggctctggc
catagctctatgcattgcccgaacattgcaagtttgcctcgacagtccatgggaggaggg
gcctttgcaaatagggtatcttctggggcaggtgttagtgttgcaactggtgaatgcttt
aaatgtcatcaaactggtcactgggcacgagactgtcctggtctcaacgtagcagcccct
tcagcttatggaagtagtgttgttcatggaggacatgggtttgttcaaaggcaacagctt
ggcggattttga
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integrated database retrieval system
