KEGG   Prosopis cineraria: 129297925
Entry
129297925         CDS       T09047                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pcin  Prosopis cineraria
Pathway
pcin03020  RNA polymerase
pcin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129297925
  09124 Replication and repair
   03420 Nucleotide excision repair
    129297925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcin03021]
    129297925
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129297925
Transcription machinery [BR:pcin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129297925
  RNA polymerase III system
   RNA polymerase III
     129297925
  RNA polymerase I system
   RNA polymerase I
     129297925
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129297925
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 129297925
NCBI-ProteinID: XP_054792243
LinkDB
Position
Unknown
AA seq 206 aa
MVLSEDEFNRLYKVRGIVMHMLSIRGYLVTDFEINMSKNEFRHKFSENMKREDLVINKAK
KDNSSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARSCIAEISSK
FHLEVFQESELLVNVTSHDLVPRHEVLTDLEKKTLLERYTVKETQLPRIQVTDPVARYLG
MKCGQVVRISRKSETAGIYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggttctctcagaggacgaattcaataggctttacaaagtcagagggatagtgatgcac
atgctgtcgattaggggttatctcgttacagactttgagattaacatgtcgaagaatgaa
ttcaggcataaattttctgagaacatgaaaagggaggacctcgttatcaataaagctaag
aaagataatagctccgaccagatctatgtttttttccctgacgaagctaaggttggagtt
aagacaatgaagacatacaccaaccgcatgaaatcagagaatgtattcagagcaatcttg
gttgttcaacagaatttgactccgtttgcccggagctgtattgctgaaatatcttcaaaa
tttcacttggaggtttttcaggaatcagaactactggtcaacgtaacaagccatgacctt
gttcctcgtcatgaggtgcttactgacttggagaagaaaacgttactcgagagatatact
gtgaaagaaactcagcttcctagaattcaggtcactgatccggttgctagatatttggga
atgaaatgtggacaggttgttaggatcagtcgaaaaagtgaaactgctggcatatatata
acctatcgatacgtcgtatga

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