Prosopis cineraria: 129298063
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Entry
129298063 CDS
T09047
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcin
Prosopis cineraria
Pathway
pcin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129298063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129298063
03009 Ribosome biogenesis [BR:
pcin03009
]
129298063
04131 Membrane trafficking [BR:
pcin04131
]
129298063
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcin04147
]
129298063
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129298063
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129298063
Membrane trafficking [BR:
pcin04131
]
SNARE
SNARE associated proteins
Others
129298063
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129298063
Exosome [BR:
pcin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129298063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
NACHT
Vps4_C
Viral_helicase1
NB-ARC
DUF815
TsaE
AAA_24
AAA_lid_PRS2_C
Zeta_toxin
KAP_NTPase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
129298063
NCBI-ProteinID:
XP_054792439
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MSHQAESSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVSMHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
DDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRSEN
PEAMDEDVDEEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPE
TETRAAGSDPFAAPAGAADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccaagctgaatcatctgactcgaaatcagggaagaaggacttctcgacggcg
attttggagcgtaagaagtcgccgaatcgactggttgtagatgaggccgtcaacgacgac
aactcagtggtgtcgatgcatcccgaaaccatggaaaagctgcagcttttccgaggcgat
acaatcctcattaaggggaagaagagaaaggatacaatttgcatcgctcttgctgacgac
acatgtgaggagcccaaaatcagaatgaataaagttgtgaggtcaaatttgagggttcgt
cttggggatgttgtatctgtgcatcagtgccctgatgttaagtatgggaaacgtgtgcat
attctacccatcgatgataccgtggaaggggtcactggcaatctgtttgacgcttacttg
aaaccttactttttggaggcttatcgccctgttagaaagggggatttgtttcttgtccgt
ggagggatgagaagtgtagagttcaaggtcattgaaactgatccaggggagtattgtgtg
gttgctccagacactgaaatcttctgtgaaggagagcctgtgaaaagggaggatgaggag
aggttggatgaagttggttatgatgatgtgggtggcgttaggaaacaaatggcacaaatt
cgtgagctggtagagcttccactcaggcatcctcaactttttaaatcaattggtgtgaaa
cctcccaaaggaattttattgtatggacccccaggttctgggaagacattaatagcgaga
gctgttgccaatgaaactggagctttcttcttttgtattaatggaccagagatcatgtct
aaattggcgggagagagtgagagcaatctcaggaaagcatttgaagaagctgaaaagaat
gcaccgtccatcatctttattgatgagcttgattctattgcgcccaagagagagaagaca
catggtgaagttgaaaggaggattgtttcacaacttttgactctcatggatggattaaaa
tctcgttctcatgtcattgttattggtgcgacaaatcgtccaaacagcattgatccggca
ttgaggaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttggg
cggcttgaagtccttcgcattcataccaaaaatatgaagctctctgatgatgttgatttg
gagagaattgcaaaggacactcatgggtatgttggtgctgaccttgctgctctttgcact
gaagctgctctgcaatgcattagggagaagatggatgtcattgacttggaagatgagacc
attgatgctgaagtactgaactctatggctgttacaaatgagcatttccaaactgctctt
ggaacaagcaatccatcagctctacgtgaaactgttgttgaggtgcctaatgtcagttgg
gatgacattggaggacttgagaatgtcaagcgcgagctgcaagagactgttcaatatcca
gtggagcacccagaaaaatttgagaaatttggtatgtcaccatcaaaaggggtcctcttt
tatggtcctccaggatgtggaaagactctgttggccaaggcaattgctaatgaatgtcaa
gcaaacttcatcagcgtgaaaggtccggaattgcttacaatgtggtttggtgaaagtgaa
gccaatgttcgagaaatttttgacaaggctagacaatctgctccatgtgtcctcttcttt
gatgagcttgactccattgctactcagagaggaagcagtgttggggatgctggtggtgct
gctgatagagttcttaatcaactactgactgagatggatggcatgtctgcaaagaagaca
gtgttcattattggggcaactaacagacctgatatcattgacccagcactccttcggcca
ggccgcctggatcagttaatctatattcctcttcctgatgaggaatcccgtcatcaaatc
ttcaaggcctgtttgaggaagtcacctgtctcaaaagatgttgatctgagagcactagct
aagtatactcagggtttcagcggggctgatattacagaaatttgccagagagcatgcaaa
tatgctataagagaaaacatagaaaaggatatagagcgagagaggaaaagaagtgagaac
cctgaggccatggacgaagacgttgacgaagaagttgcagagattaaggctgcccatttt
gaagagtccatgaagtttgcccgcaggagcgttagtgatgctgacattcgtaaatatcaa
gcatttgctcaaaccttacagcaatccagaggttttggaagtgaatttaggtttcccgag
actgaaacaagggctgctggttctgacccctttgccgctcctgctggggcggctgatgat
gatgatttgtatagttaa
DBGET
integrated database retrieval system
