Prosopis cineraria: 129298080
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Entry
129298080 CDS
T09047
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129298080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129298080
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129298080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_14
LRR_13
Motif
Other DBs
NCBI-GeneID:
129298080
NCBI-ProteinID:
XP_054792472
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MRRLEDGVVQTGSEMVGKETLRTEGLNSCFEKLVMIAGGGQGGNGVKMEGGPNSEWKDIP
VELLMQILGPVDDRTVIAASGVCRGWREAICFGLTRLSLSWCSKNMNNLVLFLAPKFSKL
QTLILRQAKPQLEDTAVDAIANSCHDLQILDLSKSFKLTDRSLYALAHGCPDLTKLNVSG
CSAFSDTALAYLASCCKKLRVLNLCGCVKAASDAALQAIGRYCNELQSLNLGWCENVGDD
GVMSLAQGCPDLRTLDLCGCICITDDSVIALANGCPHLWSLGLYYCQNITDRSMYCLAHS
KVRHRTWGSVKGGNQEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCL
SLTSVHCACAGEAHRAINAFPHPAR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgattggaggacggcgtggttcagactgggagtgaaatggtggggaaggagacc
ttgaggaccgagggcttgaactcgtgctttgagaagctcgtgatgattgctggcggcgga
caaggtggtaacggagtgaaaatggagggcgggccgaattcagaatggaaagatattccg
gtggaacttttgatgcaaatattgggccccgtggatgatcggactgtgatcgccgcttct
ggtgtctgtcgagggtggagagaagctatttgctttggcctcacccgtttatcactctca
tggtgcagcaagaatatgaataatttggtcctatttcttgcccctaaattctcaaaattg
caaactttaatccttcgtcaagcgaagccccagctggaggacaccgctgttgacgccatt
gcaaactcctgtcatgatctgcagatcctggacctgagcaaaagtttcaagctgaccgat
cgttcactgtatgccttagcccacggttgtcctgatctcacaaaactgaatgtcagtggg
tgctcagcattcagcgacactgctctggcttacctggccagctgctgcaaaaaattgagg
gtcttaaatctctgtggatgcgtgaaagctgcatccgacgctgcactgcaggcgatcgga
cggtactgcaatgagttgcagtctttgaacctaggatggtgcgaaaatgtgggtgatgat
ggggtgatgagtctagcccaagggtgccctgatcttagaacactggacttgtgcggttgc
atctgtataacagatgatagcgtgatagcattggcaaacggatgccctcatctgtggtct
ttggggctgtactactgccaaaacatcacggacaggtcaatgtattgcttggctcacagc
aaagtgaggcacaggacatggggatcagtgaaagggggcaatcaggaggatgggctaagg
actctgaacataagccaatgcacggcactcacgccctcggcggttcaggcagtgtgtgac
tcattcccagctctgcacacatgctccggcaggcattccctcatcatgagtggctgtctc
agcttgacgtcagtgcactgtgcctgtgccggcgaggcacatcgtgccatcaatgctttt
cctcatccggcacgttga
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