Prosopis cineraria: 129298318
Help
Entry
129298318 CDS
T09047
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
pcin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129298318
04120 Ubiquitin mediated proteolysis
129298318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129298318
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129298318
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129298318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
129298318
NCBI-ProteinID:
XP_054792689
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MMRLQSYAGLSFIATLAVAYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQL
TKKVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSVKHLILSWQASVSLFFAFEYM
ILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYMCFFLVIFINYG
VPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATTAGGQHGSQSDRQGTGTNT
GNSSQAEGGSGVATDNLSRHQARLQAAAAAAAMYEKSFVYPSPSATSLACAPGYTVYPPV
HRPAAESTNTELNGEHTSCEQTQRQFVIPGGPMNVSFHPMGPFLIPPSLTHVANGEGSGS
DPNGPNSLLEAQRTIQYQIEILQNQLQILQNANVNEGKSSSSISKDKEVASSSSLPDNGR
NEGIQGGTR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctacagtcgtatgcggggcttagtttcattgcaactctcgctgttgcgtat
catgcattcaacagcagaggtcaattttatccagcaatggtttttctgtcaacttccaag
atcagcttggtacttcttctcaacatgggtctggtcattatgtgtcttttatggcaatta
acaaagaaggtatttcttggcacactccgagaggcagaggttgagaggcttaatgagcaa
tcatggagggaggttatggaaatcctttttgccatcaccatttttaggcaggatttctct
gttacattccttgctatggtcacagcactgttgttgatcaaagctttacattggttggct
cagaaaagagttgaatatattgagaccactcctacagtgcccttgttgtctcacattcga
attgtgtcttttatgggtttcctcctccttctggatggactgtttttatatagttccgtg
aagcatttgatactatcatggcaggcttcagtttccctcttttttgcttttgagtacatg
atactggcaacaacaacagtgtcaatttttgtaaaatatcttttctacgttagcgacatg
cttatggaaggacaatgggaaaggaaaccagtcttcacattctacttggaactcatcagg
gatttgcttcacttgtctatgtatatgtgtttcttccttgtgattttcataaattatggt
gtgcctttacacttaatacgggagctgtatgagacatttaggaacttcaaagttcgtgtt
gctgactacattcgctatcgtaagattacttcaaatatgaatgatcggtttccagatgca
acccctgaagagcttaacgcaagtgatgctacatgtattatctgtcgtgaagagatgact
acagccaagaaacttatatgtggacatctttttcatgtgcattgcctccgatcatggttg
gagcgacaacatacttgccctacctgtagagccttggttgtaccacctgaaaatggggca
actactgctggagggcagcatggatcacagtcagatcgacagggaacaggaactaatact
ggaaactcatctcaagctgaaggtggcagtggggtggctactgataatttgagtcgtcat
caagctagactccaagctgctgctgctgctgctgcaatgtatgagaagtcttttgtgtac
ccatcaccatctgcaacttctttagcatgcgcccctggatatactgtatatcctcctgtt
cataggcctgccgctgaatctactaatacagagcttaatggagaacatacttcatgtgaa
caaacacaacgacaatttgtcatccctggtggaccaatgaatgtttcctttcatccaatg
ggaccgtttcttatccctccttctctaacacatgtagcaaacggagagggatctggatct
gatccgaatgggccaaactctcttctggaagctcaaagaacaattcaataccagattgag
attctgcaaaatcagctccagattctgcagaacgcaaatgtaaatgagggcaagtcgtca
tcatcaattagcaaagacaaggaggttgcttcctcttcatctctgcctgataatggtcgt
aatgaggggattcaaggcggtactcggtag
DBGET
integrated database retrieval system
