Prosopis cineraria: 129298633
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Entry
129298633 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC129298633
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129298633
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129298633
Surveillance factors
Other surveillance factors
129298633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
129298633
NCBI-ProteinID:
XP_054793034
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MADGKANVPDDLFSKTTDGHFSVKDEALEGHGEEKGIVGVLDDLKDQVSPDNSIPLSPQW
LYSKPIDARVSSTNTVVGNATDPILKDSWRLDGSQDKKDWRRTVPDVDISRRWREEERET
SLLGRRDRXKEDRRSEIASTPDNRGLSSDRWHDSRSSGHESRRENKWSSRWGPEDKEKDS
RSDKRNDVEKEDAYVEKQSSGVTNRAGSERDTESRDKWRPRHRMETQVGAVATYRAAPGF
GLEKGRVEASNVRFAPGRGRANINANLQIGKPILGSTFGSALMDKNIVILGKPSLNSDLY
SYPRGKLLDIYRKQKIDLTVDIMPAGVEHIPTITQLGSVEPLAFVAPASEEEAVLRDIWR
GKITSSEVSSYSFRGKDGGSTDDTSGIDENVREGKITTSIGMGGGVISGSDVLNGDGDFM
GGPSNAGASLRNIVDDTATFKEGNQKHMQTIDVHRRDENSASSTGEASTPSDNVSKPGIC
ESQQELAPVLQNHDSRSLFEFSRLQRMPRINEQDTITNERKHSSEIGTPLEELSLCYLDP
QGVIQGPFLGIDIILWFEQGFFGTDLPVRLSNAPEGSPFQELGDVMPHLKLKSGSISGGN
LISQPQPSETSGRNQTVNAHSPDYDVSTIVDDQSWVSSQSDATLSVGIHSQMPSQNFHSE
TRFSNDQSFTNFIKQDDNILSRMAGSSNDSSLTRPADVHTSHTHPSGKMVASEVSGSDTH
NEVDKLHPFGLLMSELIDGSCLRRAKSSNVSSRLGDEGHHVDPLLDRDAIFVDQGSLGGV
ANHPSYRDTWSDEYAVNRQFNPNARIGSLDDHYLSHMGPKFNNFDSAEHLMLQKLQKERL
QQQNSLPSHFASHHTVPDLERVPSLSLSQSRNSNFQQMIQTSGSDYEHLMGLQIEQQRQL
ELQQQHEMHQQQLLQQMKLQQQSQAQQLLLEQFMHQQIPDPNFRQPKLDLIRDDLFDQVQ
LRRQVLHDLQQNPCSLRHLDPSMEQIIRANIGLNAVQERQSDLSDLLLQARHGNILPSEQ
QLHFQQEQLQAQQLSMALRQQLGLEGEQQFGRSWPINDTGHLLRNSSTHQLTSSAGFNSS
DIHKTQHGLLAQDEQLNYLSRNLAEQNHRGFYEPNSLMFERSPMVSAGVPAMNFDGVNAS
VQGMDLQERPRYMHPTDQFSSLSSQHLQASDELFARHPDAYKHSLSGNNSHLENSWTDPR
LQLQHLEAGRHRIELGGTISSADLNMPASAGACDESSARGLMDLLHHKRGLQSTQSSNFD
NWHPLSSRSQDNSWHARDSDSLNYPFEISQDQQIHLNDPFEERPGSANSTIQIQDHLIMQ
MADNLRNNEKLPIQSRSGLIVEEQSFLSANKDTLHTSYRNPLLIGKSTVEKDLLELEADK
GQRHEFVGTMKASLSGISDLSEQLQSTMNSMELPATAHSRHSSLCSAGSDGGPYNREMGL
SNSRVDEIPNDRVSPSTKVLDSHFQKRPPVSRVLSSPDVQSDQSSLPHASDGRREPSGNS
SISTVVDAQASGRKEVLFRRTSSGSDGAVSETSFIDMLKRPILHEMDAASGAAAESSDGG
SQAVRSGKKKGKRGKQIDPSLLGFKVSSNRIMMGEIQRPED
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaaaggccaatgttcccgacgatctcttctcaaagactaccgatggacac
ttctctgttaaagatgaagcattggaagggcatggtgaggagaaaggtattgttggtgtg
cttgatgatttgaaagatcaagtgtcacctgacaacagcatacccttatctccacaatgg
ctctattccaagcccattgacgcaagggtatcatctaccaacaccgtggtggggaatgct
actgatcccatactgaaagatagttggcgtttggatgggtctcaagacaagaaagattgg
aggaggactgtcccagatgttgacattagtcgccgttggcgtgaagaggagagggaaaca
agcttacttgggagaagagatcgcnagaaagaagatcgtcgctcagaaattgcctcaaca
cctgataatagaggcttgtcttctgaccgttggcatgatagccgtagttctggccatgag
tctcgtagagagaacaagtggtcatcgagatggggacctgaagataaggagaaggattca
cggagtgacaaaaggaatgatgttgagaaggaagatgcttatgttgaaaagcaatcctct
ggtgttactaaccgggcaggttctgaacgtgacactgaatctcgtgataaatggagacca
cgccatcgaatggaaactcaagtgggtgccgtggccacataccgcgctgctcctggattt
ggacttgaaaaaggacgtgtagaggcttccaatgtgcgatttgctcctggacgaggaagg
gccaatatcaatgcgaacctacaaattggaaaacctatcttgggctctacttttgggtct
gcactcatggataagaacatagtcatattgggaaagcctagccttaactcagacttatat
tcctaccctaggggtaagctactagacatatatcgtaaacaaaagattgatcttactgtt
gacatcatgcctgctggtgtggagcatataccaacaataactcagcttggctctgtagaa
ccattggcttttgttgctccagcttctgaggaagaggctgtccttagagatatatggagg
gggaaaattactagcagtgaagtctcaagctactcctttagaggcaaggacggaggctca
actgatgatacatcaggcattgatgagaatgtaagggaaggaaaaatcactacctcaatt
ggcatgggaggaggggttatatcaggatctgatgtcttgaatggtgatggtgattttatg
ggtggaccttcaaatgctggtgcttcattaagaaatatagttgatgacactgcgactttt
aaagaaggaaatcagaagcatatgcagacaattgatgtacataggagagatgagaactct
gccagcagcactggagaggctagtacccctagtgacaatgtttctaaaccaggaatttgt
gaaagccagcaggaactggctccagtccttcagaaccatgattctcgctctctttttgaa
ttttcacgtctgcagcgaatgccaagaattaatgaacaagacacgataactaatgagagg
aaacattcatctgagattggtacccctttggaggagttaagtttgtgctatcttgatcct
caaggggtaattcaaggaccctttcttgggattgacatcattttatggtttgaacaaggg
ttttttgggacagatttaccagttcgattgtcaaatgctcctgaaggatcaccctttcaa
gaacttggtgatgttatgcctcatcttaaactgaaatctggatccatttctgggggtaac
ctgatttctcaaccccaaccttctgagaccagtggaaggaaccaaacagtaaatgcgcat
tctcctgactatgatgtgtctaccatagtagatgatcaatcttgggtttcatctcaatct
gatgctaccttgagtgttggtattcattcccaaatgcctagtcaaaattttcactctgaa
accaggttctcaaatgatcagtccttcacaaattttatcaagcaagatgacaacatctta
tccagaatggccggaagcagcaatgatagctctttgacaaggcctgctgatgtccacact
tcacatacccatccttctggaaaaatggttgcaagtgaagtttctgggagtgatacacat
aatgaggttgataagctgcatccctttggtctattgatgtctgagctcatagatggttct
tgtttaaggcgtgcaaaatcttccaatgtatcttcaagattaggtgatgagggccatcat
gtggatccattgcttgatagagatgctatttttgttgatcaaggctctcttggtggtgtg
gctaatcatccttcatacagggacacatggtctgatgaatatgcagtaaataggcaattt
aatcccaatgctcgtataggttctctagatgatcactacttgtcccatatgggaccaaaa
tttaataattttgatagtgcagagcatctcatgttgcagaagctgcagaaggaacgactt
caacagcagaatagtctaccttctcattttgcttcccatcatactgtgccggatttagag
agagttccaagcctttcactttctcagagcaggaactctaattttcagcagatgatccag
acttcaggatcagattatgaacatcttatgggacttcagattgaacagcaacgccagctt
gagcttcaacagcagcatgagatgcaccaacaacagcttctccaacaaatgaaattacag
cagcaatcacaagctcagcaattgcttcttgaacaatttatgcatcagcagatacctgat
cctaatttcaggcagccaaaacttgatcttataagggatgatctttttgatcaggttcag
ttgaggaggcaggtattgcatgacttgcagcagaatccttgttccttgaggcatcttgat
ccatcaatggagcagattatccgagcaaatattggtctcaatgctgtccaagaaaggcaa
tctgacctgtcggatctcttgttgcaagcaaggcatgggaacatccttccctctgaacag
caacttcattttcagcaagaacagttgcaagcacaacagctatctatggctctgagacaa
cagttaggattggagggggaacaacaatttggaaggtcgtggccaatcaatgacactgga
catctactaagaaattcttcaacccatcaacttacttcctcagcaggctttaattcctct
gatattcacaaaacgcagcatggactcttggcacaagatgaacagttaaactatctgagc
aggaatcttgctgagcagaaccatagagggttctatgagcctaattctttgatgtttgag
aggtctccaatggtttctgctggtgttcctgcaatgaattttgatggtgtaaatgcttct
gtccaaggaatggacctacaagaacgacctcgctatatgcatcccactgatcaatttagt
tctttatcctctcaacatctacaagcatccgatgaactctttgctcgtcacccggatgca
tacaagcattccctttctggtaacaacagtcatctggaaaatagttggactgacccacgg
cttcaactacaacatcttgaagctgggagacacagaatagagctagggggtaccatttca
tcagctgatctaaacatgcctgcatctgccggagcatgtgatgagagttctgcacgaggt
ttaatggacctacttcatcataaacggggtcttcaatccacacaatcatcaaattttgat
aattggcatcctctgtcatcaagaagtcaggacaactcttggcatgctcgggattctgac
tcactaaattatccttttgagatttcacaagatcaacaaatccatttgaatgatccattt
gaagaaaggcctggaagtgccaattccacaatccaaatacaagatcaccttatcatgcag
atggctgataatttaaggaacaatgaaaaattgcctattcagtctagatctggattgata
gtggaagagcagtcattcttatctgctaataaagatactttacataccagttacagaaat
ccactcttgattggtaaatcaactgtggaaaaagacttacttgagttggaggcagataag
ggtcagaggcatgagtttgtaggaacaatgaaagcatcgctttcaggtatctcagacttg
tcagagcaattacaaagcaccatgaattccatggaattgccagctactgcgcatagcaga
catagttcactatgcagcgcaggcagcgatgggggcccatacaatcgtgagatgggtttg
agtaattcacgggtagacgagattcctaatgacagggtgtctccttcaacgaaagtactt
gatagtcatttccaaaagcgccctcctgtatctcgtgttttatcttccccagacgttcag
tcagaccaatcatctttacctcatgctagtgatgggagaagagagccttctggaaactcg
tcaattagtaccgtggttgatgctcaggcttctggtagaaaagaggtcctatttaggaga
acttcctctggtagcgatggtgcagtctcagagacatcctttatagacatgcttaaaagg
ccaattcttcatgagatggacgcagccagtggagctgccgcagaatcgtctgatggtgga
tcacaagctgttcggagcggcaaaaagaaggggaaaaggggaaaacagatagatccttcc
cttcttggtttcaaggtctctagcaaccggatcatgatgggtgagattcaacgcccagaa
gattga
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integrated database retrieval system
