Prosopis cineraria: 129299177
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Entry
129299177 CDS
T09047
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129299177
Transcription machinery [BR:
pcin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
129299177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
129299177
NCBI-ProteinID:
XP_054793605
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MGVVTVSSSAARTPLGLSTKFSSHWPALKKPAILAFKGDKSNNTALVAPQEQVPLLIETA
KAHRKRIVKTNKLPKRVKAVFTDEASPSTLDVDYNEAAAKLENIFKLSPVSDTCIEEDID
NGIKTASRRRKKTDSDNQIDNDSVVRSQNKKVKRLSLDKRIALKKNRKEEVVVPKRKKRN
VKSRAEKIEELVRDYSAATDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLPVKEDL
QKDLKREPTEDELAAATNTSSIQVRKTIEVGRAARNKLIKHNLRLVLFVINKYFQDFANG
SRFQDLCQAGARGLITAIDRFEPKRRFRLSTYGLFWIRHAIVRSMTLASFTRVPFGLESV
RVDIQRAKLELTFELQRLPTEEEIIERVGISPERYHEVMKASKPILSLHSRHATTQEEFI
DAVTDFEGVNGDGRRQPAVLRLALDDVLDSLKPKESLVIRQRYGLDGQGDRTLGEIAGNL
NISREMVRKHEIKALMKLKHPARLDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtatctagctcagctgctcgtactcctttaggactgagcacaaaa
ttttcaagtcattggcctgcactgaagaaacccgcaattttagcatttaaaggagataaa
tccaataatacagccttggttgcacctcaagagcaagttcctctgctgatagaaaccgcc
aaggcacaccgtaaaaggatagtgaaaactaataaattgccaaagagagtgaaagctgtc
tttactgatgaagcatctccatccaccttggatgtggattataatgaagctgctgccaaa
cttgaaaatatattcaaactcagccctgtctctgatacttgtatcgaggaagatatagac
aacgggatcaaaacagcctcacggagaaggaagaagactgatagcgacaatcagatagat
aatgacagtgtggttagaagccagaataagaaggtcaaacgactgagtcttgacaaaaga
attgcattaaaaaagaacagaaaagaggaggtggttgttccgaaaagaaagaaaagaaat
gtgaagagtagagctgagaaaattgaagagcttgtcagggactattctgcagcaaccgat
ttagtcagcttggactggaaaaaaatgaagatacccccagttcttccctctacagagcat
acttggctgttcaaattgatgcagcctatgaaggctctccttcctgtaaaagaagattta
caaaaggatcttaaaagagaaccaacagaggatgaactagctgctgcaacaaacacgagc
agcattcaagtgagaaaaacaatcgaagttggtcgagctgcacgcaacaagcttataaag
cacaatctccgacttgtcttgtttgtgatcaacaaatattttcaagattttgcaaatggc
tcgaggttccaagatctttgtcaggcaggagcgaggggacttataacagcaattgatcgt
tttgagccaaaaagaagatttcggctatccacatatggtttgttttggataagacatgcc
attgttcgatccatgaccctcgctagcttcactcgtgtaccctttggacttgaatcggtt
agggtggatattcagagagcaaaacttgagttaacatttgagcttcagagattaccaaca
gaggaagagataatagaaagagttgggatttctcctgaaagataccatgaagtaatgaag
gcctcgaaaccaatactttcccttcattcaaggcatgcaaccacccaagaggagtttata
gatgcggtcactgattttgaaggtgttaatggcgatggcaggaggcagcctgctgttctt
aggctcgctcttgatgatgtgcttgattccctaaagccgaaggagagcttggtgatccgg
caaagatatggacttgatggtcagggagacagaacattaggagaaatcgctgggaacttg
aacatttctagggaaatggtaaggaagcacgaaatcaaggctttgatgaagctcaaacat
cctgctcggttggactatcttcgtcgttacgttgtataa
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