Prosopis cineraria: 129299385
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Entry
129299385 CDS
T09047
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
pcin
Prosopis cineraria
Pathway
pcin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129299385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129299385
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129299385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
AAA_29
AAA_23
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
129299385
NCBI-ProteinID:
XP_054793833
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MNRQRSLLSFFQKSSSTNSDSGPGHLGGNRGAPSLPIKGDKHSVLSAFTQPASLLANDSS
AEVRGTDTPPEKVPRQILPSTFSSNDKSNGATPFSRIMHKFVRDEDGGKATRRSLSSIDI
LTKTSPASGRCVNGNLKEQSKQEGAFQPIIKDDVAISNKADQEDIIPVEHNEDIPRPETP
GMQPLASRAKRCRDDGSKFSSLLDSSKRVKFLEDLTSLKRTKKEVDMVSKFEWLDPCRIR
DANGRKPDDPLYDRTTLYIPPEVLKKMSASQKQYWSVKCKYMDVVLFFKVGKFYELYEMD
AEIGHKELDWKMTLSGVGKCRQVGIPESGIDDAVQKLVARGYKVGRVEQLETSQEAKAKG
VNSIIPRKLVQVVTPSTLVDNNIGPDAVHLLAIKEGSDLNNGSVQYGFAFVDCAALRFWV
GSIDDDASCSALGALLLQVSPKEVIYESRGLSKEAQKAFKKYSLNGSTTLQLTPVQSLTD
LISPEVTDLVRLNGYFKRSSDSLDHALSKVNHPETTMCALGGLINHLTRLMLEDVLQNGD
IYPYQVYRGCLKMDGQTLINLEIFSNNADGGQSGTLYKYLDSCVTSSGKRVLRSWICHPL
KDVDGINNRLDVVDGLVSCPEIVSLIAQHLHKLPDLERLLGRIKITLQSSGPLLLPMFRQ
KVLKRRVKVFGSLVKGLRTGLNLLLLLQNEGPLMSSFTKVFKVPVLTGSCGLDQFLSQFE
AAIESDFPDYQNHEVTDADAETLATLIEVFMEKVAEWFEVVHAVNCIDVLRSFAVTSSMS
CGTMCRPVIASSSKSTSQDFVGPVLKMKGLWHPFALGELGNLPVPNDINLGEKTDVRHPH
TLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCDLSVVDIIFTRLGATDRIMTGES
TFFIECTETAQVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLIEKVNCRLLFATH
YHSLTKEFASHPHVTLQHMACAFESESDGHSKRRKELVFLYRLFAGACPESYGLQVALMA
GIPEKIVNDASKASQRMKKSIGRSFWSSEQRSEFSTLHEEWLKTLVSISRIEDCLTFDED
AFDSLFCMWCELKTSLKSGN
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccagaggtctttactctcattcttccaaaaatcttcatcgaccaactcagat
tccggccccggacacttgggcggcaaccgtggagctcccagtttgccgattaaaggagac
aagcacagtgttctgtctgctttcactcaaccggcgtcgcttctcgcaaatgattcatcc
gctgaagtcaggggaactgacacgccaccagagaaggtgccacgtcagattttgccgtcc
actttctcttcaaatgataaaagcaatggcgctactccgttttcgagaatcatgcataaa
tttgtaagagacgaagatggtggcaaagctactcggaggagcctgtcatccattgacata
ttgactaaaacatcgccagcatccggaagatgtgtgaatggaaaccttaaagaacagtcc
aaacaagaaggagctttccaacctatcataaaagatgatgttgcaatttccaataaggct
gatcaggaagacatcattcctgttgaacacaatgaggatattcctagacctgaaacccca
gggatgcagcctcttgcctctcgtgcaaagcgatgtcgagatgatggttccaagtttagt
tccttgctagattctagcaaaagagtcaaatttttggaggatttaacatccctgaaaagg
acaaaaaaggaagtagacatggttagcaagtttgagtggctggatccttgtcgtattaga
gatgctaatggaaggaagcctgatgatcctctgtatgacaggacaaccctttatatacct
ccagaagttttgaaaaaaatgtcagcatctcagaaacagtattggagtgtcaaatgtaaa
tacatggatgttgtgctattcttcaaagtggggaaattttatgagctttatgaaatggat
gctgaaattggccataaggagcttgactggaaaatgacattaagtggtgtaggaaaatgt
cggcaggttggtatccctgaaagtgggattgatgacgctgttcagaaattggtagctcgt
ggatacaaggttggaagagtggagcaattggagacatctcaagaagcaaaggccaaaggc
gttaactctattattccaagaaaattagttcaggttgtcactccatcaaccttggtggat
aacaatattggtcctgatgctgttcatcttcttgcaataaaagaggggagtgacctgaat
aatggttcagttcagtatggcttcgcttttgttgactgtgccgcacttaggttttgggtt
ggttccattgatgatgatgcatcatgttctgctttaggggctttattgttgcaagtgtca
cctaaggaagttatatatgaaagcagagggttgtccaaagaagctcagaaagcatttaaa
aaatactcattaaatggttccacgacactacaattgactccagtgcagtcgctcactgac
ttaatatcccctgaggttactgatttagttcgcttgaatggatactttaagaggtcatct
gattcactagatcatgcactgagcaaagtgaatcatcctgaaaccaccatgtgtgctctt
ggcggattgattaatcatctcactagattgatgttggaagatgtcctgcagaatggggat
atatatccataccaagtttataggggctgcctcaaaatggacggacagacattgattaac
cttgagattttcagtaataatgctgatggtggtcagtcaggcacattatacaaatatctt
gatagttgtgtaacctcatctggaaagcgggttctaaggagttggatctgccatcctcta
aaagatgttgacgggataaacaaccggctagacgtggttgatggtctagtgtcgtgcccc
gagattgtgtcactcattgctcaacatcttcacaagctaccagatttggaacgattgctt
ggccggatcaagattacccttcagtcatcaggtcctctcctactgccaatgtttcgccag
aaagtattgaagcggagggtgaaggtgtttgggtcacttgtgaaaggccttcgaactggg
ttgaatttattactgcttctacagaacgagggacctctaatgtcatcctttactaaagtt
tttaaagttccagttctgactggtagctgtgggcttgatcaatttcttagtcagtttgaa
gctgctatagaaagtgacttccccgattaccagaatcatgaggtaacagatgcggatgct
gaaacacttgctacactcatagaagtgttcatggagaaagttgccgaatggtttgaagtt
gttcatgccgtcaattgcatagatgtccttagatcttttgcagtcacttccagcatgtca
tgtggaaccatgtgtcggccagtcatagcgtcttcatcaaaaagcacaagtcaagatttt
gtgggacctgtgcttaaaatgaaggggctatggcatccatttgcccttggagagcttgga
aatttgcctgtccccaatgacataaatcttggtgagaaaacagatgtccgtcatcctcat
acgttgctgctgactggaccaaacatgggtggaaaatcaacacttctgcgtgccacctgt
ctagcagttattatggcccagctgggctgttacgtgccatgtgaaaactgtgatctctca
gttgtggatatcatcttcacaaggcttggagccactgatagaatcatgaccggcgagagc
accttcttcattgagtgcacagaaactgcacaagttcttcagaatgcgactcaagattct
ctggtcattcttgacgaattgggccggggaactagcacttttgatggctatgcaatagca
tactcagttttccgccatctgatcgaaaaggtcaactgtcgcttactatttgccacacac
taccattcgctcacaaaagagtttgcctctcatccacatgttacgctgcaacacatggcc
tgtgcttttgagtcagaatctgatggccattccaaacgtcgaaaggagctagtcttcctg
tatcgacttttcgccggagcgtgtccagagagctacggattgcaggtggctctcatggct
gggatccctgaaaagatagtgaatgatgcttcaaaggctagccaacggatgaagaaatca
attggaagaagtttttggtcaagcgaacagagatcagagttctctactcttcatgaagag
tggttgaagaccctagtgtccatctcgagaatagaagattgtctgaccttcgatgaagat
gctttcgattcgttgttttgtatgtggtgtgagctgaagacttcgcttaaatcaggaaac
tag
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integrated database retrieval system
