Prosopis cineraria: 129300437
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Entry
129300437 CDS
T09047
Name
(RefSeq) regulator of nonsense transcripts UPF2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129300437
03015 mRNA surveillance pathway
129300437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129300437
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129300437
mRNA cycle factors
P-body specific factors
129300437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
HAGH_C
Xpo1
Motif
Other DBs
NCBI-GeneID:
129300437
NCBI-ProteinID:
XP_054794985
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MKEKSQQEDEFRSGGESHSKKDDEEAAARLDEMKRSIEAKMALRQSNLSPERPDSGFLRT
LDSSIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVAAICEAKLRTSDIHAAV
QICSLLHQRYKDFTPSLIQGLLKVFSPGKSGDESDADRNLKAMKKRSTLKLLLELYFVGV
IEDCGIFINIIKDLTSAEQLKDIDSTQTSLTLLSSFARQGRIFLGLPVTGQEIHEEFLKG
LNITGDHKKSFRKAFYAFYDAAAELLRSEHSSLRLMEHENSKILNAKGELSDENVSAYEK
LRKSYDHLYRNVSSLAESLDMQPPVMPEDGHTTRVTSGEEAVSSATGKDSSVVEAIWDDE
DTRAFYECLPDLRAFVPAVLLGEVEPKSNEQPGKSQDQSTEPVPESDKGQPVTQESGDIS
MESNVLPEPETAERVKDKDDKEKSKDLDKEKGKEKDNDKKGENEKENLRNLEGTSLDALL
QRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCM
KDVSSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIASAGLVFSCLKACLD
DFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYY
LCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECESYLLKCFMK
VHKGKYGQIHLLASLAAGLSRYHDEFAVAIVDEVGTS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaagtcacagcaagaggatgaattccgcagtggaggtgaaagtcacagcaag
aaagatgacgaggaagctgctgctcgccttgatgaaatgaagaggtcaattgaggccaaa
atggctctacgtcaaagcaatttgagtcctgaaaggcctgactcaggatttcttaggaca
ctggattctagcatcaagcgcaacactgcagttattaagaaactgaagcagataaatgaa
gagcagcgagaagcactgatggatgaattgcgaagtgtcaacttaagcaaatttgtcagt
gaagctgtggcagctatatgcgaagccaagcttagaacatcagatatacatgcggcagtt
cagatctgctctttgcttcaccaaaggtacaaggacttcacaccaagcctgattcaaggg
cttctcaaagttttctcccctgggaaatctggggatgaatcggatgcagacagaaacttg
aaggcaatgaagaagcgcagcactctgaaacttctgttggaactttattttgttggtgtt
atagaagattgtggtattttcatcaacattataaaagatcttaccagtgcagaacagcta
aaagacatagactctacacaaactagtttgactcttctttctagctttgctcgccaaggg
agaatatttttaggacttcctgttactggtcaagaaattcatgaagagtttttgaaggga
ctgaacatcacaggtgatcataagaaaagtttccgaaaagcattttatgcattttatgat
gctgcagcagaactgcttcgatctgagcattcgtcacttcgactaatggagcatgaaaat
tctaagattttaaatgcaaaaggagaacttagtgatgagaacgtctctgcatatgaaaag
cttcgaaaatcatatgaccacttgtaccgtaatgtctcatcattagcagaatctctggac
atgcagcctccagtaatgccagaggacggtcacacaactagggttacaagtggtgaggaa
gctgtttcttctgctactgggaaagattcttctgttgttgaagccatatgggatgatgaa
gatactagagcattctatgaatgtttacctgatcttagagcatttgttcctgctgtgtta
ttgggggaagttgagccaaaaagcaatgaacaacctggaaagagtcaagaccaatcaact
gagccagtgcctgaatcagacaagggtcaaccagttacccaagaaagtggagacatctcc
atggagtccaatgtgttgccagagccagaaacagcagaaagagtgaaggataaggatgat
aaagaaaagtctaaagacttagacaaagagaagggaaaagaaaaagacaatgacaaaaag
ggggaaaatgaaaaggagaatcttagaaatcttgaagggactagtttggatgctttgttg
cagaggctgcctggttgtgtaagccgagatcttattgatcaattgactgtagaattctgt
tatctaaattcaaagtcgaatcggaaaaagcttgttagggcattgttcaatgtaccaagg
acatctctggaacttctaccttattattcacgaatggttgccaccctatcaacttgtatg
aaggatgtctcctccatgctcttgcagatgttggaggaggagttcaacttcttgataaat
aaaaaggatcaaatgaacattgagacgaagataaggaacatacggttcattggagaactt
tgcaagtttagaatagcctcagcaggccttgtcttcagttgtttgaaggcttgtttagat
gacttcactcatcacaacattgatgtagcttgcaatctccttgaaacttgtggtcgtttc
ttataccgatctcctgaaactactatacgtatggctaacatgttggagatattgatgcgc
ttaaaaaatgtgaaaaacttggatcccagacatagtactttagtggagaatgcctattac
ctttgcaagccaccagagagatctgcacgagtttctaaagtccgtcccccgttgcatcag
tatatcagaaaattacttttctctgatcttgataagtctaccattgagcatgtgttgagg
caacttcgtaaattgccatggggtgaatgtgaatcataccttttaaaatgcttcatgaag
gttcataagggaaaatatggtcagatacatctgctagcttctcttgctgctggtttaagt
cgctatcatgatgaatttgcagtggcaatagttgatgaggttggtacttcatga
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