Prosopis cineraria: 129300535
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Entry
129300535 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129300535
03036 Chromosome and associated proteins [BR:
pcin03036
]
129300535
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129300535
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129300535
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129300535
microRNA pathway
RISC loading complex
129300535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
129300535
NCBI-ProteinID:
XP_054795078
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MASSSPNMGTDKHESLSPLGPAISLQVESEKACVPKKKTSDGKFLPTGRRGYGSKGQKIQ
LLTNHFKVKLTNKDGGFYHYTVALFYEDGRPVEAKGIGRRVIDKVYETYASELQSKNFAY
DGQKSLFTLSSLPHNKLEFKVVLDEISSNKLGKNGSADNNTEGTDKKRMRRPFQSKTYKV
EISYAKKIPMQAIVDASSGLESDHHQESLRVLDIILRQRAAKQGCLLVRQSFFHNKVENY
RDIGGGVQGCRGFHSSFRATQGGLSLNVDVSTTLLLKPGPVLDFLCMNQNVNHPGLIDWT
KAKRMLKNLRIKANNMEYKITGLSERPCKDQTFSLKQGREANGEVKSIEITVREYYERHK
NIRLLHSANLPCINVGKPKKPTYFPIELCTSVSLQRYTKALTSLQRASAVSXSRQKPHER
MTSLTNSLRNSGYNDDPMFRSSGIDIGSQFTRAEGRVLLAPKLRVGKGEEFLPRNGRWNF
NNKQLFQPVVLARWAIVSFSARCNIRQLIEGLKRCAQMKGMTLYEPVGVFQEDQRMSRKP
ANVRVEELYKIVMNQMPGLPQFLLCILPERKNSDIYGPWKRINLAKDGKGEGVVTQCIAP
TKMNDQYFTNVLLKINAKLGGMNSFLAIEHSQSIPIVSKVPTLILGMDVSHGSPGRSDVP
SIAAVVSSRYWPQVSRYRASVRAQTPKLEIIANLFNPVSDTEDHGIFKELLDDFINSSGM
RPEHIVIFRDGVSESQFSQVLNIELDQIIQACKCFQESWDPKFTVIIAQKNHHTKFFQQV
NARENVPPGTVIDNTVCHSKNNDFYMCAHAGMIGTSRPTHYHVLYDEIGFSADELQEFVH
SLCYVYQRSTTAISVVAPICYAHLAAAQVAQFIKFDELSESSSSSSSNQFQELPRLHDRV
RNSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaagtcctaacatgggaactgataagcatgaatcactgtcacctcttggg
cctgccataagtctccaagttgaatcagagaaagcttgcgtgcctaagaagaaaacatcc
gatggaaaattcttacctacgggcagacgtggttatggatccaagggccaaaagattcaa
cttctgactaaccattttaaagttaaactaaccaataaagatggcggcttctatcactac
actgttgctctgttttatgaagatggacgccctgtggaagctaaggggattgggagaaga
gtgatagacaaagtttatgagacctatgcttctgagctgcaaagcaagaactttgcttat
gatggacaaaagtccttattcactctcagttcactcccacataacaagcttgaattcaag
gttgtgctagatgaaatttcatcaaacaagcttggaaagaatggaagcgctgacaacaac
acagagggaactgataagaagagaatgaggcgtccatttcagtccaagacttacaaggtg
gagatcagttatgctaaaaaaatcccaatgcaagcaattgtagatgcatcgagtggtcta
gaatctgatcatcaccaagaatcattaagggttctggacatcatattaaggcagcgtgca
gcaaagcagggctgtctgcttgtgcgccaatcattcttccataacaaagtagaaaattac
agagacatcggaggtggtgttcaaggttgtcgtggttttcattcgagtttccgagccact
caaggaggtttgtccttaaatgttgatgtgtcaacaacattgcttctaaagcctggtcca
gtgttggacttcctctgcatgaatcaaaatgttaaccatcctggcttaattgattggacc
aaggcaaaaaggatgttgaaaaacctgagaatcaaggctaacaatatggagtacaaaatc
actggattgagtgaaaggccctgcaaagatcaaacattttccttgaagcaaggaagagaa
gcaaacggtgaagtcaagtcaattgaaataacagttcgtgaatattatgaacgccataaa
aacatcagattgcttcattcagctaatttgccatgcatcaatgttggcaaacccaagaag
cctacttattttccgatagagctctgtacttcggtttcattgcaacgctacactaaggcc
cttaccagcttgcaaagagcttcagctgtaagtnngtcaaggcaaaagccccatgaacga
atgacatctctgacaaattcactaagaaacagcggatataatgacgaccctatgtttcgt
tcttctggaattgacattggatctcagtttacaagagctgaaggtcgtgttctactagct
ccaaagcttagagttggaaagggggaagaattcttgcccagaaatgggaggtggaatttc
aacaataagcaactttttcaacctgtggtgcttgcacgttgggctatagtcagcttctca
gctcgttgtaacatacgccaacttattgaaggcctgaaaagatgtgcacagatgaaaggg
atgaccttgtacgaaccagttggagtgtttcaagaggatcaacgtatgagtcgtaaacca
gccaatgtcagggttgaagaattgtataaaattgtgatgaatcaaatgcctgggttgccc
caatttctattgtgcatcctaccagagaggaagaattctgatatttatggtccttggaaa
agaataaatcttgcaaaagatggaaagggagaaggggttgttacacaatgtattgcacca
acaaaaatgaatgaccaatacttcaccaatgttttattgaagattaatgccaagcttggt
gggatgaattcctttttggcaatagagcattcacaatccatacctatagtttcaaaagtg
cctaccttaattcttggtatggatgtctcacatggctctcctggtcgatcagatgtgcca
tctattgctgcggttgtcagctcccggtattggcctcaagtttcccgttatcgagcatca
gttcgtgctcagacaccaaaactagagataattgctaatttgttcaaccctgtttctgat
actgaggaccatggcatttttaaggagttgttggatgactttattaattcttcaggaatg
cggcctgaacatattgtcatattcagggatggagtgagtgaatcacaattcagtcaagta
ttgaacattgagttggatcaaatcattcaggcttgcaaatgttttcaagaaagttgggat
ccaaaatttactgtgatcattgcccaaaaaaatcatcatactaaattcttccagcaggtc
aatgccagagaaaatgttccaccaggcactgttattgataatacagtttgtcactctaag
aacaatgatttctatatgtgtgctcatgctgggatgattggaacaagccggcctactcat
taccacgtgctatatgatgagattggtttctctgctgacgagttgcaagaattcgtgcat
tctctctgttatgtgtatcagagaagcaccacagctatatcagttgttgctccaatctgc
tatgctcacttagcagcagcacaagtggcacagttcatcaagtttgatgaactttcagag
tcgtcgtcttcttcatctagtaatcaatttcaagagttacctcgtcttcatgatcgagtc
cgcaactcaatgttcttctgttag
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