Prosopis cineraria: 129300598
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Entry
129300598 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129300598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129300598
03009 Ribosome biogenesis [BR:
pcin03009
]
129300598
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129300598
Spliceosome [BR:
pcin03041
]
Complex A
U1 snRNP components
U1 related factors
129300598
Complex B
129300598
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
Pre-60S particles
Helicases
129300598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
129300598
NCBI-ProteinID:
XP_054795144
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSDSGLGAPTGYGGSVHSSSSKRDYNDGESPRKLNVDGLPHFE
KNFYIESPEVRAMTEAEVNEYRQKREITVEGRDVPKPVKNFHLAGFPEYVLQEITKAGFV
EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHINAQPILEPGDGPIVLVLAP
TRELAVQIQQEATKFGSSSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESN
HTNLRRVTYLVLDEADRMLDMGFEPQLRKIVAQIRPDRQTLCWSATWPREVEQLARQSLY
NPYKVIIGSPDLKANHAIRQHVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVMYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMARG
APPPPSGYGGFRGRGYGSGRPLR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgacagtcgctctggggaccctacttcctaccgtgacaggagaagtgat
tcggggctaggtgctcccacaggttatggtggttctgtccactcttcctcaagcaaaagg
gattacaatgatggtgaatctccaaggaaattgaatgtggatggcctgcctcattttgag
aagaatttctatatcgaatcaccagaggtgagggctatgactgaggctgaggttaatgag
tatcggcagaagagggagattactgttgaaggccgagatgtcccaaaaccagtcaaaaac
tttcaccttgctggtttcccagagtatgttctgcaagaaattacgaaggctggttttgtt
gaacccacacccattcaatctcaaggttggccaatggctttgaaggggcgtgatctcata
ggaatagcagagaccggttcggggaaaacacttgcttatttattgcctgcaattgtacat
attaatgcccagcctattcttgaacctggagatggaccaattgtgctagttttggctcca
actcgtgaacttgctgtccaaatacaacaagaggctactaagtttggctcatcatctagg
attaaaagtacgtgcatatatggtggggtacctaagggacctcaggtgcgggacctccag
aaaggtgttgaaattgtaattgctactccgggaaggttgattgacatgcttgagtcaaat
catactaacttacggagagttacataccttgtgttagatgaggctgataggatgttggac
atgggctttgagcctcagctacggaagattgttgctcagattcgtccagaccgtcaaaca
ttatgctggagtgctacctggccaagggaggttgagcagctggccaggcagtccctttat
aacccatacaaagtgattataggctctccagatttaaaagctaaccatgcaatacgtcaa
catgttgacattgtttctgaaaaacagaaatatgataaattggtgaagttgctggaggac
atcatggatggcagccgaatactgatattcatggatactaagaaaggatgtgatcagatc
actcggcagctccgcatggatggttggccagcactttcaatacatggagataaaagtcaa
gcagaaagagattgggtgctgtcagagttcagatcgggaaagagtcctattatgactgca
acagatgttgcagctcgtggtttagatgtgaaggatgtgatgtatgtaataaattatgac
ttcccgggatctcttgaggactatgttcatcgcattggtcggactgggagagctggcgca
aagggaactgcatatacattctttactgctgcgaatgctagatttgcgaaggagcttatt
gccatacttgaggaagctggacagaaagtgagtcctgaattggcagctatggcccgtgga
gcacctcctccaccttcaggttatggaggtttccgtgggagaggttatggcagtggtcgc
ccgctcagatga
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