KEGG   Prosopis cineraria: 129301060
Entry
129301060         CDS       T09047                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC129301060
  KO
K12828  splicing factor 3B subunit 1
Organism
pcin  Prosopis cineraria
Pathway
pcin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129301060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcin03041]
    129301060
   03036 Chromosome and associated proteins [BR:pcin03036]
    129301060
Spliceosome [BR:pcin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129301060
 Complex B
    129301060
 Complex C
   U2 SnRNP specific factors
    129301060
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    129301060
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 HEAT_EF3_N Cnd1 Vac14_Fab1_bd XMAP215_CLASP_TOG Adaptin_N UME
Other DBs
NCBI-GeneID: 129301060
NCBI-ProteinID: XP_054795604
LinkDB
Position
Unknown
AA seq 1263 aa
MASLDPEIAKTQEERKKLEQQLASLTSVTFDTDLYGGSDKDAYLTSIPANEDEENLDAMD
NEVARKLASYTAPKSLMKDMPGVGDADADVGFRKPQRIIDREDDYRQRRLNRIISPERHD
PFAAGEKTPDPAVRTYADVMREEALKREKEETLRAIAKKKKEEEEAAKAAPEKGKEADAA
AAPKRRNRWDQSQDEGAKKAKTSDWDMPDTTPGRWDATPTPGRVTDATPGRRNRWDETPT
PGRLADSDATPAGGATPGATPAGMTWDATPKLSGMATPTPKRQRSRWDETPATMGSATPL
PGATPAAAYTPGVTPVGGVELATPTPGAINLRGAITPEQYNLLRWERDIEERNRPLTDEE
LDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPG
GLPFMKPEDYQYFGALLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDK
AREFGAGPLFNRILPLLMQPTLEDQERHXLVKVIDRVLYKLDELVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIP
ALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVR
TITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYA
SYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRR
MALDRRNYRQLVDTTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGAA
DIDSRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLN
NKSAKVRQQAADLISRIAVVMKQCQEEQLXGHLGVVLYEYXGEEYPEVLGSILGALKSIV
NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFE
LLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAE
TCSPXTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRD
LVHRQTAASAVKHMXLGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVAL
GAAVXLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDEQNNVYSRPELM
MFF
NT seq 3792 nt   +upstreamnt  +downstreamnt
atggcgtcgttggaccctgagattgcgaagacgcaggaagagcggaagaagttggagcag
cagttggcatctctcacgtcggtgaccttcgatacggatctctatggcgggagcgacaaa
gatgcctatctcacttctatcccagcgaacgaggatgaggagaatcttgatgctatggac
aacgaggttgctcggaaattggcgtcttacactgctccgaaatccttgatgaaggatatg
cccggtgtcggtgatgcagatgcggatgttggattcaggaagccgcagagaattattgat
cgagaagatgattataggcagaggaggttgaatcggattatatcgccggagcggcacgat
ccttttgctgctggtgaaaagacccctgacccggcagtgaggacgtatgcggatgtgatg
agggaggaggcgttgaagagggagaaagaggagactctgagggctattgcgaagaagaag
aaggaggaagaagaagcggctaaggctgctccggagaaggggaaggaagctgatgctgcg
gcagcgcctaagagaagaaatagatgggaccagtctcaggatgaaggggcgaagaaggcg
aagacttcagactgggatatgcccgatacaacacctggtagatgggatgcaactcccacc
cctgggagagtgacggatgcgacaccaggaaggaggaataggtgggatgaaactcctaca
cctggaagactggctgattctgatgcgactccggccggtggtgctacacctggtgcaacc
cctgctggtatgacttgggatgccaccccaaaactttctggcatggctacgccaactcct
aagaggcagagatcaagatgggatgagacacctgctacaatgggtagtgcgacaccgctg
ccaggtgccacacccgccgctgcttatacaccaggcgtaactccggttggaggagttgag
ttggctactccaactcctggggcaattaacttgcggggtgctattactccagagcaatat
aatttattgagatgggagagggatattgaagagaggaatcgtccattaacagacgaggaa
cttgatgccatgtttccccaagaaggatataagatattggagcctcctgcttcatatgtg
cctattagaacacctgcgaggaagcttcttgctaccccaactccgctggggacccctctt
tatcaaatcccagaggagaaccgtggtcagcagtttgatgttcccaaggaagcacctggt
ggtttgccattcatgaaacctgaagattaccaatactttggggcattgttgaatgaagaa
aatgaagaggaattgtcaccagaagaacaaaaggagcgtaagattatgaagcttctgctt
aaagttaagaatggaacgccaccacaaaggaaaactgcgttaagacagcttacagacaaa
gcacgtgagtttggagcagggccattgtttaacaggatcctaccattgctcatgcaacct
actcttgaggatcaagaaaggcatnctttggttaaggttattgatagagttctgtataaa
ttggatgagctggttaggccttatgtccataagattcttgttgttattgaacctctacta
attgatgaagattactatgcacgtgtggagggcagggaaatcatctccaatctgagtaaa
gcagctggcttggccacaatgattgcagcaatgcggcctgatattgacaatattgatgaa
tatgttaggaacactactgctagagctttcagtgttgttgcctctgcacttggtattcct
gcactcttacccttcttgaaggctgtgtgtcagagtaagaaatcatggcaagcccggcat
actgggattaagattgttcaacagatagccatcttgattggttgtgccgtcttgccacat
ttgaggtctcttgtggaaattatagagcatggactgaatgatgagaatcagaaggtgaga
acaatcactgcattgtcacttgctgctctagctgaggctgctgctccttatggaattgaa
agttttgactctgtactgaagcctctgtggaagggtataagacaacaccgtggaaaggtg
ttggctgcatttctgaaggccatcggttttattattcctttgatggaagctctgtatgcc
agttactataccaaggaagtcatgctgattttgattcgtgaattccagtcacctgatgaa
gaaatgaagaaaattgttttgaaagtggtgaagcagtgtgttagcactgagggtgtggag
gctgattatattaggaatgatattctgccagagtttttcaggaatttctgggttaggagg
atggctttggatagaagaaactataggcaacttgtagatacaactgtagagatagccaac
aaagttggtgttgctgatatagttgggagaattgttgaggaccttaaagatgaaagtgaa
ccttacaggcgaatggtgatggaaactattgaaaaggttgttactaacctgggtgcagct
gacatagattctcgcttggaagagctactgatcgatggtattctttatgcattccaagag
caaaccagtgatgatgctaatgtgatgcttaacggatttggtgcagttgtgaatgctctt
gggcagagagtgaaaccttatcttcctcagatttgtggtaccatcaagtggcggttaaat
aacaagagtgcaaaggtgaggcagcaagcagcagatcttatttcaagaattgctgtggtc
atgaagcagtgccaagaagaacaattgnatggccatcttggtgttgtattgtacgagtat
nctggagaagagtatcctgaagttttaggatcaattcttggagcactcaagtccattgtc
aatgttataggtatgacgaagatgactccgcctatcaaggatctgctaccacggttaacc
ccaattttgaagaacaggcatgagaaggtccaggagaactgtattgatcttgtaggtaga
attgctgaccgtggggcagagtttgtgcctgcaagagagtggatgagaatctgttttgag
cttcttgagatgcttaaggcacacaagaagggaattcgtcgtgctacagtgaacactttt
ggatatattgccaaagccattggaccacaggatgtcctggccactctattgaataacctc
aaggtgcaggagaggcaaaatcgtgtttgcacgactgtcgctattgctatagttgctgaa
acctgttcacctnttacagtcctgcctgctttgatgaacgagtatcgtgtgccagagctc
aacgtccaaaatggtgtcctgaaatccctctctttcctgttcgagtacattggtgaaatg
ggaaaagactatatctatgctgtgactccattacttgaggatgccctcatggacagggat
ttggttcacaggcagactgctgcttctgctgtgaagcacatgngcttgggtgtggctggt
ctgggttgtgaagatgctctggtccatttgctgaactatgtctggccaaacatatttgag
acctctcctcatgtcataaacgctgttatggaagccattgaaggaatgagggtagctttg
ggtgctgccgttnatctcaattactgtctccaagggctgtttcacccagcacgtaaggtt
agggaagtgtattggaagatctacaactcactttacatcggagctcaggatgctcttgta
gctgcttaccccatcctggaggacgagcagaacaatgtatacagtagaccagaattgatg
atgttcttttaa

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