Prosopis cineraria: 129301061
Help
Entry
129301061 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC129301061
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03440
Homologous recombination
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129301061
03460 Fanconi anemia pathway
129301061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129301061
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129301061
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129301061
FA (Fanconi anemia) pathway
Downstream FA components
129301061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
Pex19
Motif
Other DBs
NCBI-GeneID:
129301061
NCBI-ProteinID:
XP_054795605
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MVSAKPTSAKNPKNVYHIGGLQVEFPYHPYGSQFAFMGRVISTLNRAQREGHCHALLESP
TGTGKSLSLLCSSLAWQQNYKLNKQHTNLSHLKPAPEATTDPLVYGGGFVPDEVFPTSEN
VELPESGANKMQKKKAAPTIYYASRTHSQISQVIHELRKTAYRVPMAVLASRKHYCTNKH
ILAKENIDEECKLLLKDQAIGCPEFKNAHKVKSHPSLQRGGCYEVHDIEDIVKVGQAVKG
CSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVD
IEEDVLDKLQMELQQLCPVNALIYQPLYEMVQGLTSWIERSKKKLEKRDFRHYVSCWTGS
NALTELQEANISRQCFPILLESATKAIKVASDLELDVPHLSGMSVMTLEGLFSSLTYFFS
RNGSHMLDYQLALQRSVKKEAGRSFGNWTHTLSLWCLNPAVVFSDIANLSLSVILTSGTL
SPLNSFSSELGVQFETSLEAPHVIDVDSQVWPAVICTGPGNYPLNASYKTADVYAFQDAV
GRSLEEIFKIVPGGCLFFFPSYKLMEKLCNRWSETGQWSHLNAKEKSLFVEPRGGSQDDF
DLALKGYYDSIHLHTSPALGRKKRVKNVGYSHLHAVNSPQNSKKGGAALLGVCRGK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgcaaaaccgacgagcgccaagaaccctaaaaatgtgtatcacatcggaggc
ctccaagtggaatttccttaccatccatatggttctcagtttgcatttatgggtagagtc
atctctacccttaaccgggctcagagagaaggccattgtcacgcattgctcgagtctcca
accggtactggcaagtccctttcccttctttgttcttccctcgcttggcagcagaactac
aagttaaataaacagcacacaaatctctctcacctgaaacccgcgccagaagcaacgaca
gaccctcttgtttacggtggtggatttgttcctgacgaggtttttccgacatcagaaaat
gtggagctgccagagtctggggctaacaagatgcagaagaaaaaggctgcacccactata
tattatgcttcgaggacacactcacaaatttctcaagtaattcatgaattgcggaaaaca
gcttatagagtgcctatggctgtgctggcatcacggaagcattattgtaccaataaacat
atactagcaaaagaaaatattgatgaagaatgtaaactacttttgaaagatcaggcaata
ggatgcccagaattcaaaaatgcgcataaagtcaaaagtcatccatccctacaaagagga
ggatgttatgaggtacatgatatagaagatattgtgaaagttggacaagcagtgaaaggt
tgctcctattatgcagcccgctctatgtcagatgatgcgcaattggtattttgtccttat
agttacattatcaatccagtcatccggggagcaatggatgtagatattaaaggagctatt
gtgattctggatgaagcccacaatatagaggatatcactcgcgatgctggtagtgttgat
attgaagaggatgttttggataagctgcaaatggagcttcaacaactttgtcctgtcaat
gctttgatataccaacctttgtatgaaatggtgcagggtcttacaagctggatagaacgt
agtaaaaaaaaactagaaaagcgtgattttcggcactatgtatcttgttggactgggtca
aatgctttaacagaactccaagaagcaaatatttcacgtcagtgcttccctatcttgcta
gaatctgctaccaaggcaatcaaagttgcttcagacttggagttagatgtaccacattta
agtggcatgtcagtaatgacactagaaggcttattctcttcactaacatatttcttctca
agaaatggttctcacatgctggattaccagcttgctctgcagcgaagtgttaagaaagaa
gctggaagatcttttggaaattggacccacactttgagtttatggtgcttgaatccagca
gttgtgtttagtgacattgccaatctttctttatcggtcattttgacttctgggactttg
tcaccactgaactccttttcttctgagctaggagttcagtttgaaactagtctggaggct
ccacatgtaattgatgttgactctcaggtatggcctgccgtaatttgtactggtccaggt
aattatcctttgaatgcaagttataaaacagcagatgtatatgcattccaggatgcagtt
ggaagatctttagaggaaatcttcaaaattgtccctggtggctgtctgtttttctttcca
agttataaattaatggagaaattatgcaatcgatggtccgaaacaggtcaatggtctcat
ctaaatgcaaaggaaaagtcactttttgttgaacctagaggaggaagccaagatgatttt
gatctggctttaaaagggtattatgactcaattcatctccacacttcacctgcattgggc
aggaaaaaaagggttaagaatgttggctatagtcacttacatgcagtcaattctccacaa
aattctaagaaaggaggagctgctttacttggcgtttgtcgaggaaag
DBGET
integrated database retrieval system
