Prosopis cineraria: 129301628
Help
Entry
129301628 CDS
T09047
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129301628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129301628
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129301628
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129301628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
129301628
NCBI-ProteinID:
XP_054796164
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MSSVNPSLVSAYGSFGRAAATLTLFVEVDHSPSIHSLNLVQVMKRTRSALSSRISPSSKS
PPLPSTPPTPQTLHKTCHPKPTSVSSCYRSRKPKRIVDSLNGFSKSDPVRWVPLNLAQQE
LCLPLTFPTGQTFRWKKTGPLQYTGVVGSHLISLKHVENGDVCYCLHRTDSEIDGRTALL
DFLNARVSLTDVWKEFSASDARFAELACHLGGARVLRQDPLECLIQFLCSSNNNIQRITK
MVDYISCLGNYLGTVGGFEFHTFPTMEQLSLISEEELRKAGFGYRAKYIIGTVNSLQAKP
DGGEEWLKSLRMLDLQEVIDALCSLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATKY
LLPDLAGSRLTPKLSGRVAEAFVSKYGKYAGWAQTVLFIAELPSQKVLLPPQLRTVEQSK
HTVEDCEIEIV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgtcaacccctcccttgtttcagcctacggctccttcgggagagcggcggcg
accctgacgttgttcgttgaagtggatcacagtccatcgatacactcattgaacctggtt
caggtcatgaaaagaacaaggtccgccttatcctcaagaatctctccatcctccaaatcg
ccaccacttccttcgacgcctccaaccccacaaacactgcacaaaacctgccacccaaag
cccacatccgtgtcctcgtgctatcgctccagaaaaccaaaacgcatcgtcgattcgctc
aacgggttttcgaaatccgaccctgtgaggtgggtcccgctcaatcttgctcagcaagag
ctctgcttgcctctcacttttcccactggccaaaccttccgatggaagaagacgggacct
ttgcagtacactggagttgttggatctcacctcatatctctcaagcacgtcgaaaacggc
gacgtttgttattgccttcaccgcacggactctgagattgatggtaggactgctttgctt
gactttctcaatgcccgtgtttctctcactgacgtatggaaggagttttccgcttcggat
gccaggtttgcggagttagcgtgccatttggggggtgcccgagtgcttagacaggacccg
cttgagtgtctgattcagtttctgtgttcttctaataacaatattcaaaggattaccaaa
atggtggattatatttcatgtttgggaaattatttggggacagttggaggttttgaattc
catactttccccactatggagcagctgtcgttgatttcagaggaggaacttagaaaggcc
ggttttggttacagggccaaatatataattggcacagtaaattctttgcaagcaaaacct
gatggaggggaagaatggcttaaatctcttcgtatgttggatcttcaagaagttatagac
gccctttgttcattacctggagtgggtcctaaggtggctgcttgcatagccctcttttca
cttgatcaacatcatgccattcctgttgacacacatgtatggcagattgcaacaaaatac
ctcttacccgatcttgcaggttcccgattgactccaaagcttagcggtcgtgttgcagag
gcattcgtaagcaaatatggtaaatatgctggatgggctcaaactgtgctcttcatagct
gaattaccttcacaaaaagtcctcctacctcctcaattacgtactgttgaacagagcaag
catacagtggaagactgtgaaatagaaattgtgtga
DBGET
integrated database retrieval system
