Prosopis cineraria: 129302149
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Entry
129302149 CDS
T09047
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
pcin04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129302149
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
129302149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129302149
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129302149
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129302149
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129302149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
Beta-prop_TEP1_C
WD40_like
WD40_RFWD3
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
zf-C3HC4_4
U-box
Beta-prop_SCAP
zf-RING_5
Beta-prop_IFT140_1st
zf-RING_10
YbfN
Beta-prop_IFT122_2nd
DUF1664
Motif
Other DBs
NCBI-GeneID:
129302149
NCBI-ProteinID:
XP_054796797
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MDQLSAGPLVPAVKSDLPKLPAACDTPAAERFMSEPDKDFLCPICMQIIKDAFLTSCGHS
FCYMCIITHLRNKSDCPCCGHYLTSNQLFPNFLLDKLLKKTSACQISKTASPVEHFRLSL
QKGCDVTIKEVDTLLFLLAEKKRKMEQEEAERNMQILLDFLHCLRKQKVEELKEVQTDLQ
FIKEDISAVDKHRMDLYRARDRYSVKLRMLDESGSRKSWHSSVDKNSSGHMSSPLNVRGA
LSSGSLPMKLDGKGQVSSHGIQRKEAISGSDSQYLNQSSIALIKKKRVHAQLLVIGFVFV
YLLEQFNDLQECYLQKRRHSAEKPHSQQEEDKYVINREGYAPGLSEFQSVLTTFTQYSRL
RVIAEVRHEDLFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSNVVNEPSGAHCPVVE
MPTRSKLSCLSWNKYAKNHIASSDYEGIVTVWDVNTRQSLMEYEEHEKRAWSVDFSRTDP
FMLVSGSDDCKVKVWRTNQETSAINIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLR
NISRPLHVFNGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENIPVRTFRGHTNEKNFV
GLTVNSDYIACGSETNEVFVYHKEISKPVTWHRFGSLDIDDAEDEAGSYFISAVCWKSDS
PTILTANSQGTIKVLVLAA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaccagctctccgcggggcctctcgtccccgccgtcaaatccgacctccccaagctc
cccgccgcctgcgatactcccgccgccgagcgtttcatgtctgagcccgacaaggatttc
ttgtgcccgatttgcatgcaaatcatcaaggacgctttcctcacttcttgcggccacagc
ttctgctatatgtgcatcattactcacctccgcaacaagagtgattgcccttgctgcggt
cactacctcactagcaaccagttgttccctaatttcttgcttgataagctactaaagaag
acctccgcttgtcaaatatcaaaaacagcctcccctgtggaacattttcggttgtcattg
caaaagggttgtgatgtgacaattaaggaggtagacacccttttgttcctccttgctgag
aagaaaagaaaaatggaacaagaagaggctgagagaaacatgcagatattgctagacttt
ttgcattgcttaaggaagcaaaaagttgaagagctgaaggaggtgcaaactgatctccag
ttcataaaagaggacataagtgctgtggataaacatagaatggatttgtatcgtgcaaga
gacaggtactctgtgaaattgaggatgcttgatgagtctggatcaaggaagtcatggcat
tcatcggtggataaaaacagcagtggccatatgtctagccctctaaatgtgcgaggagca
ttgtcttctgggagtcttccaatgaaacttgatgggaagggccaagtaagctcacatgga
atccagagaaaagaagctattagcggatcagattcccaatatttaaatcaatccagtatt
gctttaattaaaaaaaagagggtgcatgcacagcttcttgttattggatttgtttttgtt
tacttattggaacagttcaatgatctacaagaatgttacctacaaaaacgacgtcattca
gcagagaagcctcatagccaacaagaagaagataaatatgtcataaaccgagagggttat
gctcctggtctttcggagtttcaatcagtcttgacaactttcacacaatacagtcgactg
agggtcattgcggaagttaggcatgaggatctatttcattcagccaacatagtgtcaagc
attgagtttgaccgtgatgatgagttgtttgctactgctggagtttcccgacgcataaaa
gtttttgacttctctaatgttgttaatgaaccttcaggtgcacactgtcctgttgtggag
atgcctacacgctcaaaacttagttgcttgagttggaacaaatatgcaaagaaccacata
gctagtagtgattatgaaggaattgttactgtttgggatgtaaatactcgacagagttta
atggaatatgaagagcatgaaaagcgcgcatggagtgttgatttttcaagaacagatccc
tttatgcttgtctctggcagtgatgactgtaaggttaaagtttggcgtacgaatcaggag
actagtgccatcaacatagacatgaaagcaaacatatgttgcgtcaagtataatccagga
tctggaaattacattgcagttggttcagcagatcatcacatccattattatgatctgaga
aatatcagccgtccactccatgtcttcaatggccacagaaaggccgtttcatatgtgaaa
tttttgtctaataatgaacttgcatctgcatcaacggatagtacactgcgattatgggat
gtaaaggagaatataccggttcgtactttcagaggccacacaaacgagaaaaactttgtt
ggtctcacagtcaacagcgactacatagcttgtggcagcgaaacgaatgaagtgtttgta
taccacaaggaaatttccaagcctgtgacttggcatagattcggttcacttgatattgat
gatgccgaagatgaggcagggtcttacttcatcagcgccgtatgctggaagagcgatagt
cccaccatactaactgcaaatagtcaggggaccattaaagttctggttcttgcagcttga
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