Prosopis cineraria: 129302248
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Entry
129302248 CDS
T09047
Name
(RefSeq) endoribonuclease Dicer homolog 2-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129302248
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129302248
microRNA pathway
RISC loading complex
129302248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
Motif
Other DBs
NCBI-GeneID:
129302248
NCBI-ProteinID:
XP_054796958
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MDSKVVEELVNESYNEEQPQYIPPELVNRFSHIDGNTVYHCYLIELKQDFTNDVSTSDVI
LATRCELDPEVIGLMEFKMCTNRGSLAVKFNYIGIKNLGLNEVLLCRRFQVAVFGILSGY
DMAKLTDILNELCLEDDLEVDYLLLPFTTTHQRPFTIDWPSSQEGCNNHIANAYTQDGLV
CSCELENSLVYTPHNGHFYIITGIMELDGNSRLRQRNGEAITYKRYYEEKYGIQLCFENQ
QLYNGRHIFQVQNYLLKNRQVKKRESTRASVELPPELCSIVMSPISASTIYSLSFIPPII
HRLESLLVASNLKKMCMQNDIPTDKILEAITTKECQESFDYDLLETLGDSFLKYITCQHL
YQTYPFDPEGPLTEKKNKMISNASLSRLGCNSKLPGFIRSRPFDPKKWIIPGDRSRNVTL
KEELVSDMTKMYVGGNRKMKYEIIADVVEALIGAFLSTGGEKAALKFMDWIGIKVEFEIT
PNKRLLNIDPERLVNVRFLESLLNYSFNDRSLLVEALTHSSYIQPEIPTCYQRLEFLGDS
VLDFLITEHLYNKYPGLSPGLLTDMRSASVNNDCYPQFAIKAGLHKHIIHSSQELEKNIV
KAINKFEESSTKPTFGWDAETYFPKVLADIIESLAGAIMVDSGFNKDIVFKSIIPLLEPL
VTPETVPIQPVRELHELCQKQYYKYKKPLVSRSNDLTCVTVRVLANGKIYEKTSKAPNGD
MAEKLACKELMTYLKKINNV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaggtggtggaagaattagtgaatgaatcctataacgaagagcaacctcag
tatatcccacctgaattggtcaatagattttcacacattgatggcaatacagtgtatcac
tgctatttaatagagttgaaacaagactttaccaatgatgtttctactagcgatgttatt
cttgccacaaggtgtgagcttgatccagaagttattgggttaatggaatttaaaatgtgt
actaaccgagggagcctagcagtaaagtttaattacattggaataaaaaatcttggccta
aatgaggttcttttgtgcagaagattccaggtcgctgtgtttgggattctttctggctat
gatatggctaagttgacagacattttaaatgaactctgtttggaagatgatcttgaggtt
gattatcttcttcttccattcactaccacacatcaaagacctttcaccattgactggcct
tcatctcaagaaggttgcaacaatcatattgcaaatgcatacactcaagatggccttgtt
tgttcctgtgaacttgaaaattcattggtctatactcctcataatggtcatttttatatc
attactggtataatggaattggatgggaactctcggctaagacaaaggaatggcgaagca
attacatacaaaagatactatgaagaaaagtatggaattcaattatgttttgaaaaccag
cagctatataatggaaggcatatatttcaagtgcaaaattacctactcaaaaacagacaa
gtgaagaaaagagaatcaaccagggcttcagttgaactgcctcctgaactgtgctctatt
gttatgtcacccatatcagccagtacaatatattcattatcattcattccaccaataata
catcgtcttgagtcattgcttgtggcttccaacttgaaaaagatgtgtatgcaaaatgat
attccaacagacaagatcttggaagcaattactacaaaggaatgtcaagaatcatttgac
tatgacttgctagagactcttggagattctttccttaaatatattacttgtcagcatctt
tatcaaacttatccatttgatcctgaaggtccccttactgagaagaagaacaagatgata
tctaatgcctctcttagtaggctagggtgcaactctaaacttccgggcttcatacgaagc
agaccttttgatccaaagaaatggattataccaggagataggtctagaaatgttactttg
aaagaggaattggtctctgatatgacaaaaatgtatgttggtgggaacagaaaaatgaaa
tatgaaataattgctgacgttgttgaagccttgattggggctttcctcagcacaggtgga
gagaaagctgctttgaagtttatggattggattggaataaaagtggaatttgaaataacg
cctaataagaggcttttaaacatagatccagagagacttgtcaatgtcagatttctggaa
tccttgttaaactactcattcaatgaccgttccctcttggtggaagctctcacccatagc
tcttacatacagccagaaattccaacatgttatcagcgactagaatttcttggggattct
gtgttggattttctcatcactgagcatctctacaataaatatcctggcctgtctccaggg
ttgttgactgacatgaggtctgcttccgtaaataatgattgttatcctcagtttgccatt
aaggctgggttacacaaacacataatccattcctctcaagaattagagaagaatattgtt
aaagcgataaataagtttgaagagtcatctactaaaccaacttttggatgggatgcagag
acatattttcctaaggtacttgcagacattatagagtctctagctggagcaattatggtt
gattcagggttcaacaaagacattgtgttcaaaagcatcatacctttattggaacctttg
gtaacacctgaaactgtaccgattcaacctgttcgtgaattgcatgaactctgccaaaaa
caatattataaatataagaagccattggtttccagaagcaatgacttgacttgtgtcaca
gttagggttctagctaatgggaaaatttatgagaaaacctctaaagctcccaatggggac
atggctgaaaaactagcttgcaaggaacttatgacttacttgaagaaaatcaataatgta
tga
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