Prosopis cineraria: 129302444
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Entry
129302444 CDS
T09047
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129302444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129302444
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129302444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
129302444
NCBI-ProteinID:
XP_054797312
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MEIQNCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTSFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYFADPKTLWNWFEPYVK
DEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPTTHSG
STGESTRRGSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTVSHHERNGSDDPR
RSPRRSSHIQSREYSDKDWDRERETSGDQSRARDRDRNHYRGRDRDRKSEKGRDRDFERD
RETYRDRDRDSERDRRDRERDREHNYDHDKRSRYTERGHNDRRHYRSRSRSPSRSRSQSL
QNGAPQFESGSKEKPSTSANLAKLKDIYGDMNNGKADANMERVRRRVNDDEEVIRLGGST
WKY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagattcagaattgtggcaggccaattgattctttgttagagaaagttctttgtatg
aatattctgtcctctgattacttcaaggagctctaccgattaaaaacataccatgaagtc
attgacgagatttacaatcaagttgatcatgtggagccatggatgacagggaattgtcgt
ggtccttctacttccttctgtcttctttacaaattttttaccatgaagctcactgtcaag
caaatgcatgggctgttgaaacaccccgattctccttacataagagcggttggatttctc
tacttaagatattttgctgatcctaagacattgtggaactggtttgagccatatgtcaaa
gatgaagaggaattttctccaggatctaatggacgaatgaccacaatgggtgtatatatc
cgtgatttacttcttggacagtattacttcgacaccctgtttccacgtatccccgttcct
gtactgaggcaagttgtggctaatcttgagaagctgaagcttcccaccacacattctggt
tcaacaggggaatccacccgtcgtggttctgatgatactgcccgccggccaccttctgtg
aaagcatccctttcggtctcatttggtcagcgtgctccacatcgtgcctcaactagggac
tcatcaccaattcgccgcactgtatctcaccatgaaagaaatggcagtgatgatccacgg
agatctccaagaagaagcagtcacatccagagccgtgaatattctgacaaggattgggac
cgagaaagggaaacgtcaggagatcagtcccgagccagggacagggatcgaaatcattac
aggggcagggacagggaccgtaaatcagagaagggcagagacagagacttcgagagagat
cgtgaaacatacagggacagggacagggattcggaaagagatagaagagatagggaaaga
gatcgagagcataattatgatcatgataagaggtccaggtatacagagagaggacacaat
gataggaggcactatcgtagtaggagcaggagtccaagtagaagcagaagtcaaagcttg
caaaatggtgctcctcagtttgaatctgggagtaaggagaagccatctacatcagccaat
ctggctaagcttaaggatatctatggtgatatgaacaatggtaaagcagatgccaacatg
gaaagagttcgtaggagggttaatgatgacgaagaggttattagacttggtggttctact
tggaagtattga
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