Prosopis cineraria: 129302484
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Entry
129302484 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129302484
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129302484
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129302484
Surveillance factors
Other surveillance factors
129302484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
129302484
NCBI-ProteinID:
XP_054797390
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MFNIGVLYGPDEALEGHGEEKGIVGVLDDLKDQVSPDNSIPLSPQWLYSKPIDARVSSTN
TVVGNATDPILKDSWRLDGSQDKKDWRRTVPDVDISRRWREEERETSLLGRRDRRKEDRR
SEIASTPDNRGLSSDRWHDSRSSGHESRRENKWSSRWGPEDKEKDSRSDKRNDVEKEDAY
VEKQSSGVTNRAGSERDTESRDKWRPRHRMETQVGAVATYRAAPGFGLEKGRVEASNVRF
APGRGRANINGNLQIGKPILGSTFGSALMDKNIVILGKPSLNSDLYSYPRGKLLDIYRKQ
KIDLTVDIMPAGVEHIPTVTQLGSVEPLAFVAPASEEEAVLRDILRGKITSSEVSSYSFR
GKDGGSTDDTSGIDENVREGKITTSIGMGGGVISGSDVLNGGGDFIGGPSNAGASLRNIV
DDTATFKEGNQKHMQTIDVHRRDENSASSTGEASTPGDNVSKPGICESQQELAPVLQNHA
NQDLIESPAAIDMNSNLPNDSRSLFEFSRLQRMPRINEQDTITNERKHSSEIGTPLEELS
LCYLDPQGVIQGPFLGIDIILWFEQGFFGTDLPVRLSNAPEGSPFQELGDVMPHLKLKSG
SISGGNLISQPQPSETSGRNQTVNAHSPDYDGSTIVDDQSWVSSQSDATLSVGIHSQMPS
QNFHSETRFSNDQSFTNFIKQDDNILSRMAGSSNDSSLTRPADVHTSHTHPPGKMVASEV
SGSDTHNEVDKLHPFGLLMSELIDGSCLRRAKSSNVSSRLGDEGHHVDPLLDRDAIFVDQ
GSLGGVANHPSYRDTWSDEYAVNRQFNPNARIGSLDDHYLSHMGPKFNNFDSAEHLMLQK
LQKERLQQQNSLPSHFASHHTVPDLERVPSLSLSQSRNSNFQQMIQTSGSDYEHLMGLQI
EQQRQLELQQQHEMHQQQLLQQMKLQQQSQAQQLLLEQFMHQQIPDPNFRQPKLDLIRDD
LFDQVQLRRQVLHDLQQNPCSLRHLDPSMEQIIRANIGLNAVQERQSDLSDLLLQARHGN
ILPSEQQLHFQQEQLQAQQLSMALRQQLGLEGEQQFGRSWPINDTGHLLRNSSTHRLTSS
AGFNSSDIHKTQHGLLAQDEQLNYLSRNLAEQNHRGFYEPNSLMFERSPTVSPGVPAMNF
DGVNASVQGMDLQERPRYMHPTDQFSSLSSQHLQASDELFARHPDAYKRSLSGNNSHLEN
SWTDPRLQLQHLEAGRHRIELGGTISSADLNMPASAGARDESSARGLMDLLHHKWGLQST
QSSNFDNWHPLSSRSQDNSWHARDSDSLNYPFEISQDQQIHLNDPFEERPGSANSTTQIQ
DHLIMQMADNLRNNEKLPIQSRSGLIVEEQSFLSANKDTLHTSYRNPLLIGKSTVEKDLL
ELEADKGQRHEFVGTMKASLSGISDLSEQLQSTMNSMELPATAHSRHSSLCSAGSDGGPY
NREMGLSNSRVDEIPNDRVSPSTKVLDSHFQKRPPVSRVLSSPDVQSDQSSLPHASDGRR
EPSGNSSISTVVDAQASGRKEVLFRRTSSGSDGAVSETSFIDMLKRPILHEMDAASGAAA
ESSDGGSQAVRSGKKKGKRGKQIDPSLLGFKVSSNRIMMGEIQRPED
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacattggcgttttgtatgggccagatgaagcattggaagggcatggtgaggag
aaaggtattgttggtgtgcttgatgatttgaaagatcaagtgtcacctgacaacagcata
cccttatctccacaatggctctattccaagcccattgacgcaagggtatcatctaccaac
accgtggtggggaatgctactgatcccatactgaaagatagttggcgtttggatgggtct
caagacaagaaagattggaggaggactgtcccagatgttgacattagtcgccgttggcgt
gaagaggagagggaaacaagcttacttgggagaagagatcgcagaaaagaagatcgtcgc
tcagaaatcgcctcaacacctgataatagaggcttgtcttctgaccgttggcatgatagc
cgtagttctggccatgagtctcgtagagagaacaagtggtcatcgagatggggacctgaa
gataaggagaaggattcacggagtgacaaaaggaatgatgttgagaaggaagatgcttat
gttgaaaagcaatcctctggtgttactaaccgggcaggttctgaacgtgacactgaatct
cgtgataaatggagaccacgccatcgaatggaaactcaagtgggtgccgtggccacatac
cgcgctgctcctggatttggacttgaaaaaggacgtgtagaggcttccaatgtgcgattt
gctcctggacgaggaagggccaatatcaatgggaacctacaaattggaaaacctatcttg
ggctctacttttgggtctgcactcatggataagaacatagtcatattgggaaagcctagc
cttaactcagacttatattcctaccctaggggtaagctactagacatatatcgtaaacaa
aagattgatcttactgttgacatcatgcctgctggtgtggagcatataccaacagtaact
cagcttggctctgtagaaccattggcttttgttgctccagcttctgaggaagaggctgtc
cttagagatatattgagggggaaaattactagcagtgaagtctcaagctactcctttaga
ggcaaggacggaggctcaactgatgatacatcaggcattgatgagaatgtaagggaagga
aaaatcactacctcaattggcatgggaggaggcgttatatcaggatctgatgtcttgaat
ggtggtggtgattttattggtggaccttcaaatgctggtgcttcattaagaaatatagtt
gatgacactgcgacttttaaagaaggaaatcagaagcatatgcagacaattgatgtacat
aggagagatgagaactctgccagcagcactggagaggctagtacccctggtgacaatgtt
tctaaaccgggaatttgtgaaagccagcaggaactggctccagtccttcagaaccatgcc
aatcaggatcttattgagtcacctgctgccatagatatgaatagcaacttgcctaatgat
tctcgctctctttttgaattttcacgtctgcagcgaatgccaagaattaatgaacaagac
acgataactaatgagaggaaacattcatctgagattggtacccctttggaggagttaagt
ttgtgctatcttgatcctcaaggggtaattcaaggaccctttcttgggattgacatcatt
ttatggtttgaacaagggttttttgggacagatttaccagttcgattgtcaaatgctcct
gaaggatcaccctttcaagaacttggtgatgttatgcctcatcttaaactgaaatctgga
tccatttctgggggtaacctgatttctcaaccccaaccttctgagaccagtggaaggaac
caaacagtaaatgcgcattctcctgactatgatgggtctaccatagtagatgatcaatct
tgggtttcatctcaatctgatgctaccttgagtgttggtattcattcccaaatgcctagt
caaaattttcactctgaaaccaggttctcaaatgatcagtccttcacaaattttatcaag
caagatgacaacatcttatccagaatggccggaagcagcaatgatagctctttgacaagg
cctgctgatgtccacacttcacatacccatcctcctggaaaaatggttgcgagtgaagtt
tctgggagtgatacacataatgaggttgataagctgcatccctttggtctattgatgtct
gagctcatagatggttcttgtttaaggcgtgcaaaatcttccaatgtatcttcaagatta
ggtgatgagggccatcatgtggatccattgcttgatagagatgctatttttgttgatcaa
ggctctcttggtggtgtggctaatcatccttcatacagggacacatggtctgatgaatat
gcagtaaataggcaatttaatcccaatgctcgtataggttctctagatgatcactacttg
tcccatatgggaccaaaatttaataattttgatagtgcagagcatctcatgttgcagaag
ctgcagaaggaacgacttcaacagcagaatagtctaccttctcattttgcttcccatcat
actgtgccggacttagagagagttccaagcctttcactttctcagagcaggaactctaat
tttcagcagatgatccagacttcaggatcagattatgaacatcttatgggacttcagatt
gaacagcaacgccagcttgagcttcaacagcagcatgagatgcaccaacaacagcttctc
caacaaatgaaattacagcagcaatcacaagctcagcaattgcttcttgaacaatttatg
catcagcagatacctgatcctaatttcaggcagccaaaacttgatcttataagggatgat
ctttttgatcaggttcagttgaggaggcaggtattgcatgacttgcagcagaatccttgt
tccttgaggcatcttgatccatcaatggagcagattatccgagcaaatattggtctcaat
gctgtccaagaaaggcaatctgacctgtcggatctcttgttgcaagcaaggcatgggaac
atccttccctctgaacagcaacttcattttcagcaagaacagttgcaagcacaacagcta
tctatggctctgagacaacagttaggattggagggggaacaacaatttggaaggtcgtgg
ccaatcaatgacactggacatctactaagaaattcttcaacccatcgacttacttcctca
gcaggctttaattcctctgatattcacaaaacgcagcatggactcttggcacaagatgaa
cagttaaactatctgagcaggaatcttgctgagcagaaccatagagggttctatgagcct
aattctttgatgtttgagaggtctccaacggtttctcctggtgttcctgcaatgaatttt
gatggtgtaaatgcttctgtccaaggaatggacctacaagaacgacctcgctatatgcat
cccactgatcaatttagttctttatcctctcaacatctacaagcatctgatgaactcttt
gctcgtcacccggatgcatacaagcgttccctttctggtaacaacagtcatctggaaaat
agttggactgacccacggcttcaactacaacatcttgaagctgggagacacagaatagag
ctagggggtaccatttcatcagctgatctaaacatgcctgcatctgccggagcacgtgat
gagagttctgcacgaggtttaatggacctacttcatcataaatggggtcttcaatccaca
caatcatcaaattttgataattggcatcctctgtcatcaagaagtcaggacaactcttgg
catgctcgggattctgactcactaaattatccttttgagatttcacaagatcaacaaatc
catttgaatgatccatttgaagaaaggcctggaagtgccaattccacaacccaaatacaa
gatcaccttatcatgcagatggctgataatttaaggaacaatgaaaaattgcctattcag
tctagatctggattgatagtggaagagcagtcattcttatctgctaataaagatacttta
cataccagttacagaaatccactcttgattggtaaatcaactgtggaaaaagacttactt
gagttggaggcagataagggtcagaggcatgagtttgtaggaacaatgaaagcatcgctt
tcaggtatctcagacttgtcagaacaattacaaagcaccatgaattccatggaattgcca
gctactgcgcatagcagacatagttcactatgcagcgcaggcagcgatgggggcccatac
aatcgtgagatgggtttgagtaattcacgggtagacgagattcctaatgacagggtgtct
ccttcaacgaaagtacttgatagtcatttccaaaagcgccctcctgtatctcgtgtttta
tcttccccagacgttcagtcagaccaatcatctttacctcatgctagtgatgggagaaga
gagccttctggaaactcgtcaattagtaccgtggttgatgctcaggcttctggtagaaaa
gaggtcctatttaggagaacttcctctggtagcgatggtgcagtctcagagacatccttt
atagacatgcttaaaaggccaattcttcatgagatggacgcagccagtggagctgccgca
gaatcgtctgatggtggatcacaagctgttcggagcggcaaaaagaaggggaaaagggga
aaacagatagatccttcccttcttggtttcaaggtctctagcaaccggatcatgatgggt
gagattcaacgcccagaagattga
DBGET
integrated database retrieval system
