Prosopis cineraria: 129302502
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Entry
129302502 CDS
T09047
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pcin
Prosopis cineraria
Pathway
pcin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129302502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcin04131
]
129302502
Membrane trafficking [BR:
pcin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
129302502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
129302502
NCBI-ProteinID:
XP_054797417
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MMVDGIEDEEKWLAEGIAGIQQNAFYMHRALDANNLREALKYSAHMLSELRTSKLSPHKY
YELYMRAFDELRRLEVFFKDESRHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIRSKD
APVREVLKDLVEMCRAVQHPIRGLFLRSYLSQVSRDKLPDIGSIDEGDADSVMDSVDFVL
QNFTEMNKLWVRLQYQGPSQIREKREKERNELRDLVGKNLHVLSQIEGVDLDMYKDIVLP
RVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLLPTVDIKAILSQLME
RLSSYAASSTDVLPEFLQVEAFAKLSSAIGRVIEAQVDMPIVGAIALQVSLLTFTLHVHP
DRLDYVDQVLGACVKKLSGKPKLDDSRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMD
HLDDETNKVMAMVIIQSIMRNNTCISTADKVEVLFELIKGLIKDLDGTALDEFDEEDFNE
EQNSVARLIHMLHNDDPEEMVKIIFTVKKHIMNGGPKRLPFTVPSLVFSALRLVRQLRGL
DGDVVGEEIPTTPKKIFQLLNETIEVLSSVPSPELALRLYLQCAEAASDCDLEPVAYEFF
TQAFVLYEEEIADSKAQVTAIHLIIGMLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDGLKDGERVLLCLKRALRIANAAQQMANVTRGTSGPVTLFVEILN
KYLYYFEKENPQITNSAIQGLIELIATEIQNPASDVFFASTLRYIQFQKQKGGLLAQKYD
SIKV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgacggaatagaagacgaagagaaatggctagcagaggggatagcgggcatt
caacagaatgccttttacatgcatcgcgccctggatgccaacaatctcagggaagccctg
aaatactcggctcacatgctatcggagcttcgaacttctaaactctcccctcacaaatat
tatgaactatatatgagagcctttgacgagctcaggaggctggaggtgttttttaaagat
gagagcagacacggcgtctcagttgttgatttatacgagctggtccaacatgctggaaat
atattgcctagactgtatctactatgcactgtgggatctgtttatatcagatctaaggat
gctcctgtcagggaagttcttaaagatctagtggaaatgtgtcgtgctgttcaacatcca
attcgtggcctgtttttgaggagttacctttctcaagtcagtagggacaagttaccggac
attggttctatagatgaaggtgatgctgacagtgtgatggactctgttgactttgttctg
cagaacttcacagaaatgaataagctctgggtgcgcttgcagtatcagggacccagtcag
ataagggaaaagagggaaaaagaaagaaacgaactccgtgaccttgttggaaagaacctc
cacgtactgagtcaaatagagggtgtggaccttgacatgtacaaagatattgttcttcct
agggtcttagagcaggttgttaactgcaaggatgagcttgcccaattttatctgatggaa
tgcataattcaggtgtttcctgatgagtaccatttgcagactctcgagacacttttaggt
gcttgtccccaactgctgccaacagtagacatcaaggcaatattatctcaattaatggag
agattgtcaagttatgcagcgtcaagcactgatgttttgccagaatttctgcaagtggaa
gcatttgccaaattaagcagtgcaataggcagggttatagaagcacaggtcgacatgccc
attgtgggagcaatcgctttgcaagtctctcttcttacgtttactctccatgttcatcca
gatcggcttgattatgtggatcaagtgctgggagcctgtgtcaagaagctttctggaaag
ccaaaacttgatgacagcagagcaacaaaacaagttgttgcacttttaagtgctccattg
gataaatacaatgatattgtgacagccctgacactctctaattatccccgtgtaatggat
catcttgatgatgaaacaaataaagttatggcgatggttattatccaaagcataatgagg
aataacacttgcatctctacagccgacaaggttgaggtgttgtttgaattaataaaaggg
cttatcaaggatttggatggaacagccttggatgagtttgatgaagaagatttcaatgaa
gaacaaaattctgttgcccgcctcatacacatgcttcataatgatgatcctgaggaaatg
gtaaagattatatttactgtgaagaaacatattatgaatggaggaccaaagcgcttacct
ttcacagttccttcccttgtattttctgcacttaggctggttaggcaactacgagggctg
gatggagatgttgtgggagaagagattcctacgacacccaaaaaaatatttcaactctta
aatgagaccattgaagttctttcttctgtcccatctccagagctggcgcttaggctgtat
cttcaatgtgctgaggctgctagtgattgtgaccttgagcctgttgcttatgaatttttc
acccaggcatttgtattatatgaggaagaaattgcggactccaaagctcaggtaactgca
attcatctaatcattgggatgcttcagaggatgaatgtctttggtgttgagaacagggat
actttgacacacaaggctaccgggtattctgcaaaactcttgaagaagcctgatcagtgc
cgggctgtctatgcatgctcacatctcttttgggttgatgatcaagatggtcttaaagat
ggagaacgggtattgctttgccttaagcgcgccttgaggattgcaaatgctgctcagcaa
atggccaatgtgacaaggggcaccagtggtccagtaactttatttgttgagatactgaac
aagtacttgtactattttgagaaagaaaacccacagatcacaaattctgcgattcagggg
ctgatagaattaatcgccactgagattcagaatccagcttcggatgttttctttgccagc
acattgcggtacatacaattccagaagcagaagggtgggctactggcccagaaatatgat
tctatcaaggtttga
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