Prosopis cineraria: 129302872
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Entry
129302872 CDS
T09047
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
pcin
Prosopis cineraria
Pathway
pcin03015
mRNA surveillance pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129302872
09123 Folding, sorting and degradation
03018 RNA degradation
129302872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129302872
03041 Spliceosome [BR:
pcin03041
]
129302872
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129302872
mRNA cycle factors
Stress granule specific factors
129302872
Spliceosome [BR:
pcin03041
]
Complex C
Other components
Complex C specific factors
129302872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_MUD2_C
RRM_ACIN1
RRM_3
RRM_7
RRM_RdRP1_2
RRM_Nup35
RRM_MARF1
BRAP2
RBD_DGKtheta
C16C6_04
Motif
Other DBs
NCBI-GeneID:
129302872
NCBI-ProteinID:
XP_054797725
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAQMQVQHPNPLSAVNGVAPAPTGNQFPGASLYVGDLDLDVTDSQLYDLFNRLGQVISVR
VCRDVTSRRSLGYGYVNYSNTQDAARAVDELNFTPLNNKPIRIMYSNRDPSSRKSGAANI
FIKNLDKTIDHKALHDTFSAFGNILSCKIATDASGQSKGYGFVQFDKEESAQNAIDKLNG
MLLNDKQVYVGHFLRKEDRESLSNKEKFNNVYVKNLSESMMDEDLKKIFGEYGTITSVVV
MRDADGKSKCFGFVNFENADDAAKAVESLNGKKFDNKEWYVGKAQKKYERELELKGRFEE
VMKEALDKYHGTNLYVKNLDDNISDEKLKELFSGFGTVKSCKVMREPNGISRGSGFVAFS
APEEASRALAEMNGKMVAGKPLYVAYAQRKEDRRARLQAQFSQMRPVQLMPSVGPRMPMY
PPGAPGLGQQFLYGQAPPAMIPPQAGFGYQQQLVPGMRPGGAAMPNFFVPMVQQGQQGPR
SGGRRAAGPLQQSQQPMQLMQQQMIPRGRAYRYPPGRSMQDVPMPGGAGGMLSPPYDMSG
LPIRDAAGQPLPRQALATALANAPPEQQRTMLGEALYPLVEQLEHDAAAKVTGMLLEMDQ
PEVLHLIESPEALKAKVAEAMDVLRNVAQQGSSPTDQLASLSLNDNLVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatgcaggtgcagcatccgaaccccttgtcggctgtcaatggtgtagcgccg
gctcctaccgggaaccaattcccgggtgcatccttgtacgttggggatcttgacctggac
gtgaccgattctcagctctacgatctcttcaatcggttggggcaagttatttctgttcga
gtatgcagggacgtcaccagccgtcgatctcttggttatggttatgtcaattacagtaat
actcaggatgcggccagagcagtggatgaactgaatttcacaccgctgaacaacaagccc
atcaggattatgtattccaaccgggatcctagcagtcggaagagtggtgctgccaatata
tttatcaagaatttggataagacaattgaccacaaggctttacatgatactttttctgct
tttggaaatattctttcttgcaagatagcaacagatgcatctggccagtccaaaggctat
gggtttgttcaatttgacaaagaagaatctgcacaaaatgccattgacaagttaaatggc
atgcttttaaatgataaacaggtctacgtagggcattttctgcgaaaggaagatagagaa
agtctttctaacaaggaaaaatttaataatgtctatgtgaaaaacctgtcagagtcaatg
atggatgaagatttgaagaaaatttttggagaatatggtaccattactagtgttgtggta
atgagagatgcagatggtaaatcaaaatgttttggttttgtgaattttgaaaatgcagat
gatgctgccaaagctgttgagtcacttaatggaaagaaatttgataataaggagtggtat
gttggaaaagctcaaaagaaatatgaaagagagcttgagttgaaaggacgttttgaggag
gttatgaaggaagcacttgacaaatatcacggcacaaacttgtatgtcaagaatttggat
gataacatcagtgatgagaaattaaaggaactgttctctggatttggtacagtaaaatcc
tgcaaggttatgcgagaaccaaatggaataagtaggggatcaggatttgttgccttctcg
gctcctgaagaagcctctcgggctcttgcggagatgaatggtaaaatggttgcgggtaaa
cctctgtatgttgcatatgctcaaagaaaagaagacagaagagcaagattacaggcacaa
ttctcacaaatgaggcctgttcaattgatgccttcggttggtcctcgcatgccaatgtat
cctcctggtgctccaggtcttgggcaacaatttttgtatgggcaagcacctcctgccatg
attcctccacaagctgggtttggttatcagcagcagcttgttcctgggatgaggcctggt
ggtgctgcaatgccaaacttttttgttccaatggtccagcagggtcaacaaggcccacgt
tctggtggacgccgtgcagcaggtcctttgcaacaatcccagcaaccaatgcaactgatg
cagcagcagatgattccaagaggacgtgcctatcgttaccctcctggtcgcagcatgcaa
gatgttccaatgccaggaggagctggtggaatgctttctcccccttatgacatgagtggt
ttaccaatccgggatgctgcaggccaaccattgcccaggcaggcattggcaacggccctc
gctaatgcgccacctgaacagcagaggaccatgctgggtgaagctttataccccctagta
gaacagctggagcatgatgcagcagctaaggtaacaggcatgcttttggagatggaccag
cctgaggtgttgcatcttattgaatcaccagaagctctcaaggctaaagttgccgaggcc
atggacgttttgagaaatgttgctcagcaaggtagcagcccaaccgatcaactggcttcg
ctctctcttaatgataatctagtttcttaa
DBGET
integrated database retrieval system
