Prosopis cineraria: 129302903
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Entry
129302903 CDS
T09047
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129302903
09122 Translation
03013 Nucleocytoplasmic transport
129302903
03015 mRNA surveillance pathway
129302903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129302903
03041 Spliceosome [BR:
pcin03041
]
129302903
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129302903
TREX complex
129302903
Spliceosome [BR:
pcin03041
]
Complex C
Other components
EJC/TREX
129302903
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129302903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_11
Motif
Other DBs
NCBI-GeneID:
129302903
NCBI-ProteinID:
XP_054797781
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MATSLDMSLDDRIKTRSNRERGRGRGRAPRGRGAGQNLGVGRMPGAARRAPLGINSRPSA
YAIAKSMRRTRRFPWQHDLFEDSLKAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFAEIG
DLKRYAVHYDRNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEVVGANAELPIS
ARVNVSGINGQRKRTVVMTPGGRGRPGGRTGGPAMFNRGPGWGRRGGGRTGGMGMRGRGG
GRGRGRGWGRGKKDAVEKSAAELDKELETYHAEAMHIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctacttccttggatatgtcacttgatgataggataaaaaccagaagtaacagggag
aggggtagagggcgtggcagagccccccgtggccgtggagcaggtcagaatcttggggtt
ggaagaatgcctggtgcagctcgtagagctcctcttggaattaattctcggccatctgct
tatgccattgccaagtctatgcgcagaaccaggcgttttccatggcagcatgatttattt
gaagatagcctaaaagctgcagggatccaaggagtagaagtaggcacaaagttgtatgtt
tccaacttggatcatggagtaaccaatgaggatataagggaactttttgcggagattgga
gacctgaagcgctatgcagttcactacgacagaaatggacgtcctagtggttctgctgaa
gttgtctatactagaaggagtgatgcatttgcagctcttaaacgatacaataatgttctt
ttggatggaaagcccatgaagattgaagttgttggtgccaatgcagaattgcctatatca
gctcgggtgaatgtgtctgggataaatgggcagaggaagaggacagttgtcatgacgcct
ggaggtcgaggtcgacctggaggtagaactggaggtcctgctatgtttaatcgtggtcca
ggatggggacgtcgtggtggtggaaggactggtggcatgggcatgcgtggccgaggtggt
ggacgtggtaggggtcggggctggggtcgcgggaagaaggatgcagttgagaaatctgca
gcggaacttgacaaagaactggagacttatcatgctgaggccatgcatatctcatga
DBGET
integrated database retrieval system