Prosopis cineraria: 129303028
Help
Entry
129303028 CDS
T09047
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129303028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129303028
03036 Chromosome and associated proteins [BR:
pcin03036
]
129303028
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129303028
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129303028
PBAF complex
129303028
GBAF(ncBAF) complex
129303028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7685
Motif
Other DBs
NCBI-GeneID:
129303028
NCBI-ProteinID:
XP_054797997
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MPTSPSENRTKWRKRKREPQISRRQPKHEDEDDEEEDPNGDDDHLERQDDSEDQTQHPNP
QSGSNSQAQLEIEVLSDDGVQISQFPRVIKRTVNRPHASVTAIVALERANESGDNKGQLQ
NSPFLENLSYGQLQTLSTVPADSSALDQDRNEGSNSAYVITPPPLLEGRGIVKRFGSRVL
VVPMHSEWFSPATVHRLERQVVPRFFSGKSPDHTPEKYMECRNYIVARYMEDLGKRITIF
DCHGLLVGVDNEDLTRIFRFLDHWGIINYCALVPSHEPWNDKSYLKDEASGEIRVPSDAL
KSIDGLIKFDKPKCKLKAEEIYLSLTTQNADISDLEDRIREHLSENHCNYCSRPLPAVYY
QSQKEADVLLCTDCFHDGGFVVGHSSIDFIRVDSTRDYSDLDGDSWTDQETLLLLEAMEI
YHENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPRMSLSSNMSNTDDCGRLRSN
LGAELAGPTQSIDPNSRLPFSNSENPVMALVAFLASAIGPRVAAACAHAALAELSGNNSG
SAPQAEAPGHSNRMNLESKLSKDGGPLGEIANPNQQDEDEAKALGSQGPNEGEAIPLSSE
KVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIINHQLKRLELKLKQFAEIETLLMKE
CDQMEKARQRFAAERSRLVSAWLGSGVATNTSGVGPSTVSNNNGNSRQQMAFGSPSQPSV
SAYTSGQAVHPHMSFVPRPSVFGGLGQRLPLSMIQQSQSTSPNPMFKAPGNVQPSTNHPL
LRPVSGTNSGLG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttccccttcggaaaaccgaaccaaatggcggaagcgcaagagagaaccccaa
atcagccgccggcaaccgaagcatgaggacgaggacgacgaagaagaagacccaaatggc
gacgacgaccacctcgagcgacaggatgactccgaggaccagacccaacaccctaacccc
caatctggttctaattctcaagcgcagctcgagatcgaggtcttgtctgacgatggagtc
caaatttcccagttccctcgagtgatcaagcgcactgtcaatcgccctcacgcatccgtt
actgcaattgtcgccctggagcgtgccaatgagtctggagacaacaagggtcagctgcag
aattctccatttctggagaatttgtcttacgggcagcttcagacgctttccaccgtgccc
gctgatagttcagctctggatcaggaccgtaacgagggaagtaattcggcttatgtgatc
accccgccccccctactggaaggccgtggcattgtcaagcggtttgggagtagggttctg
gtagttccaatgcattcagaatggttttcaccagctacagtgcatcggcttgagagacaa
gtcgtgccacggttcttctctggaaaatcaccagatcataccccagagaagtacatggaa
tgtagaaattatatagttgcacgatacatggaagacctggggaagaggattacaattttt
gattgccatggattgttagttggggttgataatgaagatttaactcggattttccggttt
cttgatcattggggaatcatcaactactgtgctcttgtgccaagtcatgagccttggaat
gacaagtcatacctaaaggatgaggcaagtggtgagattcgtgtgccatcagatgcctta
aaatctattgatggtttgatcaaatttgacaagccgaagtgtaaactcaaagcagaagaa
atttatttatcattgacaactcagaatgctgatatttctgatttggaggacagaataagg
gagcatctgtctgaaaatcactgcaattattgttctcgtccgcttcctgctgtttactat
cagtcacaaaaagaggctgatgttcttctctgcactgattgtttccatgatgggggattt
gtcgttggtcactcaagtatagattttattagggttgattcaacaagagattatagtgat
ctagatggggatagttggactgatcaagaaaccttgctgctgcttgaggcgatggagatt
taccatgagaattggaatgaaattgctgagcatgtgggtaccaaatcaaaagcacaatgt
attctccattttctccgtctacccatggaagatggaaaattggaaaatatcaatgttcca
aggatgtctttgtcatcaaatatgtcaaatacagatgattgtggaagattgcgttcaaat
ttaggtgcggaattagcaggaccaactcagagcattgatcctaacagcaggctccctttt
tcaaattctgaaaatcctgttatggctctggttgcctttttggcctctgctatcggacca
agagtagctgctgcttgtgcacatgcagcattggcagaattgtcagggaataattctggt
agtgcgccacaggcagaagcaccagggcatagcaacaggatgaacttggaaagcaaactt
agtaaagatggtggtcctcttggagaaattgcaaatccaaatcagcaggatgaggatgag
gcaaaagcgcttggttcacagggtccgaatgagggtgaggccatccctctatcttctgag
aaagttaaagatgctgctaaggcaggcttgtctgctgcagcaatgaaagctaaactgttt
gcagatcatgaagaaagagaaattcagaggctatgtgctaatattataaaccatcagctg
aaaagattggagctgaagctcaagcagttcgctgaaattgaaacgctgttgatgaaagaa
tgtgaccaaatggagaaggcaagacaaagatttgctgctgaacgttcccgtcttgtatcc
gcatggcttggatctggtgtagccacaaacacatcaggtgtgggtccttcgacggttagt
aataataatggcaacagtagacaacaaatggcctttggatctccttcgcagcccagtgtc
tcagcgtacacaagtggccaagcagttcatccacatatgtcctttgtcccacggccttcc
gtgtttggtgggctagggcaaaggttaccgctttctatgatacaacaatcacaatcaact
tctcccaatcccatgtttaaagcccctggtaatgtgcagccttctaccaatcatcctttg
ttgaggcctgtatcaggtactaactctggtttaggttaa
DBGET
integrated database retrieval system
