Prosopis cineraria: 129303061
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Entry
129303061 CDS
T09047
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pcin
Prosopis cineraria
Pathway
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129303061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129303061
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129303061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129303061
NCBI-ProteinID:
XP_054798043
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DRVIKEKHNIDGRMVEAKKAVPRDDQNMLNRNSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKR
AVPKELSPGPNRSPLSGYNYGMGRVNSFLNGFTQGYTPNAVGGYGLRMDGRFSPVASGRS
GFAPFGSGYGMSMNFEPGLSPGFGGNENFNSNLSYARGLNPYYVGSSNRFGSTIGYDGGN
GGNNSFFSSATRNLWGSGGLNYGTGSANSNNAYMGSGSGNAGGNSFGTGVNWDSSGVSGQ
GGLSNVSQSSGNLHYGGGDSSYGLGAGGYGGSGGSSIAPTSSYSSSNGAFDGAFTDFYNS
SSVYGDPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGYIGGYTVNKRQPNRAWLVKQ
PDVEVSAE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggatagtggcaagttatttattggtgggatatcatgggacacaaatgaagag
cgacttagggagtatttcagtacttatggggaggtcgtggaagcagtgataatgaaggat
cggacaactggtagagctcgtggatttggttttgtagtttttgccgacccagctgttgca
gacagagtcataaaagagaagcacaacattgatggaaggatggttgaggcaaagaaggct
gttcctagagatgaccagaacatgctgaacagaaacagtggcagcatccatggttctcct
ggtccaggccgcacaagaaagatatttgtaggaggtttagcatcaactgttactgagagt
gatttcaagaagtactttgatcaatttgggactataacagatgttgtagtgatgtatgat
cataacactcagaggccaagaggctttggatttatcacttatgattctgaagaagctgtt
gagaaggtcttactcaagacttttcatgaactgaatggtaaaatggttgaggtcaagcgg
gcagttcctaaggaattatcaccaggaccaaaccgcagcccacttagtggatataattac
ggtatgggtagggtcaatagtttcctaaatggcttcacgcaggggtatactccaaatgct
gttggaggctatggactgaggatggatggtagattcagtcctgttgcaagtggtcgaagt
ggatttgctccgtttggatctggttatggaatgagtatgaattttgagcctggcttgagc
cctggatttggcgggaatgaaaacttcaatagcaatcttagctatgctcgggggttaaat
ccttattatgttggcagctcaaataggtttgggagtactattgggtatgatggtggtaat
ggaggaaacaattctttcttcagctctgcgactcgaaacttgtgggggtctggcggtctt
aattatggaacgggctctgcaaattccaataatgcatacatgggatcaggaagtgggaat
gctggaggaaactcatttgggactggagtaaactgggattcttcaggagtttctggtcaa
ggtggtttgagcaatgtgtcacagagtagtggcaaccttcactatggaggtggcgacagt
agttatggtttgggagctggagggtatggagggagcggtggtagcagtattgccccaaca
tcatcatactcctcatcaaatggtgcgtttgatggggcctttactgatttttacaatagt
agttcagtttatggggatcccacctggcgatcttcaaattctgagcgagatgggtctggt
ccctttggttatggtcttggtagtgcagcttcagatgtttctgccaaaagctctcctggt
tacattggtggttatactgttaataagagacagccaaatagagcttggcttgtgaaacag
ccagatgtagaagtttctgctgaatga
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