Prosopis cineraria: 129303170
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Entry
129303170 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcin
Prosopis cineraria
Pathway
pcin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129303170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcin04131
]
129303170
Membrane trafficking [BR:
pcin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129303170
Hops complex
129303170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
129303170
NCBI-ProteinID:
XP_054798259
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MANVSVAAEWQLLYNRYYRKPEIYPMRWKHIDLGRNKVACAPFGGPVAVIRDDSKIVQLY
AESALRKLRIFNSAGVQLAETVWKHPXGRLIGMAWTDDQILVCIVQDGTIYRYNIHAELL
EPNISMGKECFEQNVVDCVFWGNGMVCITEANQLFCIADFKNPKPTKLADPAIPELPHCM
AVIEPQYTMSGNVEVLLGVDDAVVLSVEEDAVQQLGVEMLRGPLQKMVVSRDGKWLASFT
HDGRLLVTTSDLTGVIIERECESGLPPEQLAWCGMDAVLLYWDDMLLMMGPDGDPVRYFY
DEPIILIPESDGVRILSNTSMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRSSLPEAVEACVDAAGHEFDVLRQRTLLRAASYGQAFCSNFQRDRIPEMCKIL
RVLNAVRSPEIGIPLSIQQYKLLTPSVLIGRLINAYQHLLALRISEYLGMNQEVVIMHWA
CSKITSSLTIPDAALLEILLDKLKMCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDIALMKATESGDTDLVYLVLFHIWQKRQPLEFFGTIQARPLARDLFITYA
RYYKHEFLKDFYLSTGQLQDVAFLLWKESWELDKNPMASKGSPLHGPRIKLIEKAQNLFA
ETKEHVFESKAAEEHAKHCRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIKDWAALEKFSKEKKPPIGYRPFVEACIEAEEKAEALKYIP
KLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFSQNAAASSIFDTLRDRLSF
QGVS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtctcggtcgccgcggagtggcagctcctgtacaatcgttactaccggaag
cctgaaatctaccctatgaggtggaagcacatcgaccttggtcgcaacaaagttgcttgt
gcccctttcggtggtcctgtcgccgtgatccgtgatgactccaagatcgtccagctctat
gccgagtccgctcttcgcaagcttcgaattttcaattccgctggcgttcagttagcggaa
accgtgtggaagcatcccngtggccggcttattggcatggcttggactgacgatcaaatc
cttgtctgcatcgtgcaggatggcacaatttatcggtataatattcatgctgagcttttg
gaaccgaacatttcgatgggcaaagagtgtttcgagcagaacgtggtggattgtgtgttt
tggggcaacgggatggtgtgcattactgaggcgaatcaattgttctgcattgcagacttc
aaaaacccgaaacccactaagcttgcagaccccgcaattccggagttgccgcattgtatg
gcagtgatcgagcctcagtacacaatgtccggaaacgtggaggtgctacttggagtggat
gatgctgttgttttatctgtggaggaagatgcggtgcagcaattgggggttgagatgttg
cgggggccattgcagaaaatggtagtgtcgcgtgatgggaagtggctggcctcgtttaca
cacgatggtcgccttttggtcaccacttctgacttgactggcgttatcatcgagagggag
tgtgagtcaggacttcctccagagcagcttgcttggtgcggaatggacgctgtgctactt
tactgggatgacatgcttttaatgatgggtcctgacggagatccagttcgctacttctat
gatgaacctataattctcatacctgagagtgatggagtgaggatattgtccaacactagt
atggagtttcttcagcgggtccctgattccactgtttcgatatttacaattggaagtaca
tcacctgcagctttactatatgatgccctggatcattttgataggcgaagtgctaaggca
gatgaaaacttgagattgataagatcgtcccttcctgaggctgttgaagcatgtgttgat
gctgctggacatgagtttgatgtcttgcggcaacgaactctcttaagagcagctagttat
ggccaagctttctgcagcaattttcaacgtgatcgtattccagagatgtgtaaaattcta
cgggttttgaatgcagttcgcagcccagagattggcattcctcttagtattcagcagtat
aagttgctcacaccatctgttctgattgggcgcttgataaatgcttatcaacatctgctt
gcactgcggatatcagagtatcttggaatgaatcaagaggtggtgataatgcactgggca
tgttcaaagataacttcatcattgactattcctgatgccgcacttcttgaaattctgctt
gataagttaaaaatgtgcaaaggcatatcctatgcagcagtagctgcccatgcggacaag
aatggccgccgaaagttagcagccatgcttgttgaacatgaaccacgctcttctaaacag
gttcctctgttgttaagcataggagaagaagatatagccttgatgaaggcaactgaaagt
ggtgacacagaccttgtttatcttgtcctctttcatatatggcaaaagaggcaacctttg
gaattctttggaacaatacaagccagaccactagcacgtgacttatttataacttatgca
cggtactataaacacgaatttctgaaggacttctacctatcaacaggacaacttcaagat
gtggcttttctgctgtggaaagaatcatgggaactagacaaaaaccccatggcaagcaaa
gggtctccccttcatggtcctcgtataaaactgattgagaaggcacaaaatctctttgca
gaaacaaaggaacatgtttttgaatcgaaggcagctgaagagcatgcaaagcactgcaga
atacaacatgaattagaagtgaccacaaagcaagccatatttgtagattcaagtataagt
gatacaatccgtacatgtattgtattgggaaatcatcgagctgcaatgaaagtaaaaaca
gaatttaaggtgtctgagaagagatggtattggctgaaagtttttgctttagctaccatc
aaagattgggctgcactggaaaagttttcgaaggagaagaaacctccgattggttacagg
ccgtttgtggaggcatgcattgaagcagaagaaaaggcggaagctttgaaatatatccca
aaacttgcagatcctcgagaaagggctgagtcatatgcgcgaatcggcatggcgaaggaa
gctgcggatgctgcttctcaggctaaagatggtgaattactcggtcgtttgaaattgact
ttttcacaaaatgcagcagcgtcatcaatatttgatactctccgagatcggctgtctttc
cagggtgtctcatga
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