Prosopis cineraria: 129303213
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Entry
129303213 CDS
T09047
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129303213
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129303213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
129303213
NCBI-ProteinID:
XP_054798342
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MLQLICIALFFLVSFSPLGRAMLNLTLPGQHPDPDSVVREFHRKVNASIVRRKMLAESQI
QEPSCLTGNPIDDCWKCDPDWPNNRQRLAECAIGFGQYAKGGQGGEFYIVTDSSDDDAVN
PKPGTLRYAVIQTQPLWIVFPSNMMIKLSQELIFNSHKTIDGRGADVHIVGGGCITLQYI
SNVIIHNVHIHHCHPSGEANVRSSPDHYGWRTESDGDGISIFGSKDIWIDHCTLSRCRDG
LIDAVMGSTGITISNNYFSHHNEVMLLGHSDEYQPDSGMQVTIAFNHFGEQLVQRMPRCR
KGYIHVVNNDYTHWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVDTEEGKWKGWN
WRSEGDVMVNGAFFVASGEGVEVKYEKAYSVEPKSADHIDFLVMHAGVLGISRDNNLGMW
SRGPNGEGDEITVTGPEYTDDMARTTRLLPESYAVGGIWCLVAFLWAVLCEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctccaactaatctgcattgctctgttctttctggtgtcgttctcaccgcttgggaga
gcaatgctgaacctcactcttcctggccagcatcccgaccccgattctgtcgttcgagaa
tttcacaggaaagtgaatgcttcaattgtgagaaggaaaatgctagcagagtcgcagata
caagagccgtcgtgtttaacagggaacccaattgacgattgctggaaatgcgacccagat
tggcccaataacaggcagaggttagctgaatgcgccattgggttcggtcagtacgccaag
ggaggccagggtggcgaattctacatcgtcaccgactcctctgacgacgacgccgtgaac
ccgaaacctggtactctcagatacgccgtgattcagacgcagccactgtggattgtgttt
cccagtaatatgatgattaaattgtctcaggagctcatcttcaatagccacaaaactatc
gatggccgtggggctgacgttcatattgtgggcggtggctgcatcactctccagtatatt
agcaatgtcatcattcacaacgttcacatccaccattgtcatccctcaggggaggctaac
gtgcggtcgagcccagatcactacgggtggcgaacggaatcggacggcgacgggatatcg
atattcgggtcgaaagacatatggatcgaccactgcacgctgtcccggtgcagggacggg
ttgatcgacgcggttatgggttccacgggcatcaccatttccaacaactacttctcgcat
cacaacgaggtgatgctgctgggccacagcgacgagtaccagccggactccggcatgcag
gttaccatcgccttcaatcacttcggcgagcagctggtgcagaggatgccgaggtgccgg
aagggatacatccatgtcgtcaacaacgactacacgcactgggagatgtacgcgatcgga
ggcagcggaaaccctacgatcaacagccaggggaatcggtacacggcgccaacgaatccg
ttcgcgaaggaggtgaccaagagagtggacacggaggaagggaagtggaaggggtggaac
tggagatcggaaggggacgtaatggtaaacggagcattcttcgtggcttccggcgaaggc
gtggaggtcaagtacgagaaggcctacagcgtcgagcctaagtcggccgatcacattgat
ttcctcgtaatgcacgccggtgtgctcggcatttccagggataacaacctggggatgtgg
agcagagggccgaacggagaaggggatgagataacagtgacaggacctgaatacacggac
gacatggcgaggacgacgaggttgctgccggagtcttatgctgtgggtgggatatggtgt
ttagtagcattcttgtgggcggtgttatgtgaattgtga
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