Prosopis cineraria: 129303563
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Entry
129303563 CDS
T09047
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129303563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129303563
Enzymes [BR:
pcin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
129303563
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
129303563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
129303563
NCBI-ProteinID:
XP_054798926
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MVSPQNSNVSSMPPTQQAYKYGITKPISLAGPTEADIHRNMQLEKFLVDAGLHESKEEAA
KREEVLCRLDRIVKSWVKQLTRQRGYADQMVEDANAVIFTFGSYRLGVHGPGADIDTLCV
GPSYVNREEDFFIILHDILADMEEITELQPVADAHVPVMKFKFQSISIDLLYAGISLLVV
PEDLDISSVSVLYHVDEPTVRSLNGCRVADQILKLVPNVENFRTTLRCLKHWAKRRGVYS
NVIGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENDLGFA
IWDPRRNPRDRFHHMPIITPAYPCMNSSYNVSASTLRVMMDQFQFGNKICEEIELNKAEW
SALFELYSFFEAYKNYLQVDIIAADADDLLAWKGWVESRLRLLTLKIERDTNGMLQCHPN
PHECTDTSKPGPHCAFFMGLQRKEGIRDQEGQQFDIRGTVDEFRQEINMFMYWKPGMEIY
VSHVRRKQLPAFVFPDGYKRIRMSRHLNHLAEKASRDATKCYSESVERCIKRKNDTETDV
KPVKREKQASISPQRLDSAFPKCSNSRSGGISQMSIDLIEGSKIDSSVNKDEDGNLEIKS
PGRHLGGGTINLGSLTERNGTRIVDSKLDKMQSESPEVQNENGINEDKDRDHDLDCLERA
NYVSSASTQNLNYEPPDPRIRSVV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtccccagaattcgaatgtttcatcgatgccgcctactcaacaagcgtataag
tatgggatcacgaaacccatctctctggccggccccaccgaggctgatattcatcgtaac
atgcaattggagaagtttctggtcgatgccgggcttcatgagagcaaagaagaagctgca
aagagagaggaagttttatgccgccttgatcggattgtaaaaagctgggtgaagcagctg
acccgccagcgaggctatgcagaccagatggtggaggatgcaaatgctgtcattttcacg
tttggttcttatcgacttggggtacatggacctggagctgacatagacaccctttgtgtt
ggcccttcctatgtaaatcgagaggaagacttttttatcattttgcatgacatccttgct
gatatggaagaaatcactgaacttcaaccagttgccgatgctcatgtaccagtaatgaag
ttcaagttccagagtatatctattgatttgctttatgctggtatatctcttttggttgtt
ccagaagacttggatatttctagtgtgtctgtgctgtatcatgttgatgaacctactgtt
agaagtcttaatggctgccgagtggcagatcaaattcttaaacttgttccaaacgttgag
aacttccgaaccaccctgagatgtttgaagcattgggctaaaaggcgtggtgtttattca
aatgttattggatttcttggcggtgtgaattgggctcttctagttgctcgagtttgccag
ctttatcctaatgcaattcctagcatgttggtttctcggtttttcagagtatatacacaa
tggcggtggccaaaccctgtgatgctatgctctatagaagagaatgatctgggcttcgcc
atatgggatcctcgtaggaatccccgggacaggtttcatcatatgccaataattaccccc
gcatatccttgcatgaattccagctacaatgtctctgcaagcacgcttcgtgttatgatg
gatcagttccagtttggcaacaagatatgtgaggaaatagagcttaacaaagccgagtgg
agtgctctttttgaactgtattctttttttgaggcgtacaaaaactacttgcaagttgac
ataattgcagcagatgctgatgatttgctagcatggaagggctgggtagaatcccggttg
aggctgctcaccctgaagatagagagggacaccaatgggatgttgcagtgtcatcctaat
ccacatgagtgtactgacacatccaagcctggtccacattgtgcatttttcatgggcttg
caaagaaaagagggaataagagatcaagaaggacagcaatttgatatacgtggaacagtt
gatgaatttaggcaagagataaacatgtttatgtattggaaaccaggaatggaaatttat
gtttctcatgttcgtcgaaagcagctccctgcatttgtttttccggatggttataagcgt
attcgaatgtcaaggcatctgaatcatttggctgaaaaagcaagcagggatgccacaaag
tgctactctgagtctgttgaaaggtgcatcaagaggaaaaatgatactgaaacagatgtg
aagccagtaaaacgagagaagcaagcctctattagtccccagaggttggattctgctttc
cctaagtgtagtaatagtagatcaggtggtatttctcagatgagtattgatttaattgaa
gggtctaaaatagacagttcagtaaacaaggatgaagatggaaatttggaaattaagtca
cctgggagacacctaggaggtggaaccattaatctaggcagtctcacagagagaaatgga
acacgtatagttgattccaaacttgataagatgcaatcagaaagccctgaagttcagaat
gagaatggtataaatgaggacaaggatcgggatcatgatttagattgtttggaacgtgcc
aactatgtgtcaagtgccagcacccagaacctcaactacgagccaccagatcccagaatc
agaagtgttgtataa
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