Prosopis cineraria: 129304001
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Entry
129304001 CDS
T09047
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129304001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129304001
03041 Spliceosome [BR:
pcin03041
]
129304001
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129304001
Spliceosome [BR:
pcin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129304001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129304001
NCBI-ProteinID:
XP_054799586
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MEDGEIEEAPVPVEEEDQRDGQSVEECKSEESPYEMLQYGKASVEKIVAEMLSLKREGKP
KSQLRELVTQMFLNFVTLRQANRSILIEEDRVKMETERAKAPVDFTSLQLHNLMYEKSHY
LKAIKACKDFKTKYPDIELVPEEEFFRDAPEDIKESILSNDSGHNLMLKRLNFELFQRKE
LCKLHEKLELQKKSLSETIANRKKFLSSLPSHLKSLKKTSLPVQNQLGVLHTKKQKQLHS
AELLPPPLYVIYSQLLAQKEAFGESIDVETMGSLKDAQAFARHQAQKDTGISPTVESFKI
DDDAPDEEEDGQRRRKRPRRVQVKESLDQAGVFQVHPLKVILHVYDDEGSDPKPAKLITL
RFEYLVKLNVICVGIEASNDNPENDILCSLFPDDTGFELPHVLAKLSVGDSMMFKGHRTS
RPYKWAQHLAGIDFLPEASPLLLSGCEASGDRAKNEDVMSGLSLYRQQNRVQTVLERIRS
RRKAQLALLEQLESLVKLEWPLLSCKSVPWALHTPSCNLDVWSPVRSISNESSSLVVVDK
EEHSQEPMNVDAGEKSGTTKEELEGTREDGELPSLLPNISVVGDVEPPYSKGSSLDHSKQ
LSLISKSITPHLNKVKSRSFKNFDENCDFLMDAESDLDEPAQIEPEPEDMAYDLCPKRSG
ISWMDYGLKEFCLVLSGKIGVDRRTVNLEAKIKISMEYPVRPPLFALTICLVSSGNKHQE
NDDLDWYNELRAMEAEVNLHMLKVLPADQQNHVLAHQVRCLAMLFNCYLDEASQSSEGRS
CTSVVDVGLCKPVNGRFLNRSFRGRDRRKIVSWKNLEFIPN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtgagatagaggaggctccagttcctgtggaagaagaagaccaacgtgat
gggcagtcagtggaagaatgcaagtcggaggaatctccttatgaaatgctgcagtatggc
aaagcttccgtggagaagatcgtggccgagatgctctctcttaaaagagagggtaaacct
aagtcgcagctccgggagctcgttactcagatgttcctcaacttcgtcactcttcgccag
gcaaatcgttccatcttgattgaggaagaccgtgttaaaatggaaacagaacgtgcaaag
gcacctgtagacttcacatccttgcagcttcacaacctgatgtacgagaaaagtcactat
ctcaaggcaataaaggcttgcaaagacttcaaaacaaaataccctgatatcgaacttgta
cctgaagaagaatttttccgtgatgcacctgaagatataaaggaatccatattgtctaac
gatagtggccacaatttgatgctcaagaggctaaattttgagctatttcagcgcaaagag
ctttgcaagcttcatgagaaactggaactgcaaaagaaaagtctttctgagacaattgca
aatcgaaagaagttcctctcaagtctcccttcacatctcaaatctcttaagaaaacatcc
ttgccagtgcaaaatcaattaggagttttgcatactaagaaacaaaagcagcttcattca
gcagagttgcttccaccacctctatatgtgatttactcacagctgttggctcaaaaggag
gcatttggagaatccattgatgtggagaccatgggaagtctcaaagatgctcaagctttt
gcccgccatcaagctcaaaaggacactggcatttcccccactgtggaaagtttcaaaata
gatgatgatgcacctgatgaggaagaagatgggcagaggcggagaaaacgaccgaggagg
gttcaagtcaaggaaagccttgatcaggcaggagtatttcaagttcatccacttaaagtc
atcctccatgtgtatgatgatgagggatctgatcccaagccagcaaagctcattactcta
agatttgaatacttggtgaagttgaatgtcatttgtgttgggattgaagcatctaatgat
aatcctgagaatgatatcttatgcagcttgttccctgatgacactggttttgaacttcct
catgtgttagccaagctctctgttggggattctatgatgttcaaaggtcatagaacttca
cgaccttacaaatgggctcagcacctcgcgggtattgatttcttgccagaggcatctcct
ctgctgctatctggctgtgaagcatcaggcgacagagcaaagaatgaagatgtcatgtct
gggctttcactttatcgccagcagaaccgggtgcagacagttctggagagaatacgttca
cgtaggaaagctcagttggctcttctggagcagcttgaatctcttgtgaaacttgagtgg
cctcttctatcctgcaaaagtgttccatgggctttgcacactccttcatgcaatttggat
gtttggtcacctgtaagatccatatcaaacgagtcttcatccctcgtggttgtggataag
gaggagcacagtcaggaaccaatgaatgttgatgcaggtgagaaatctggcaccacaaaa
gaagaactagagggtacaagggaagatggggaacttccatctttgctgcctaacatttct
gttgttggtgatgtcgaacctccttattcaaaaggatccagtctagaccattccaagcag
ctgagcttgatttcaaaaagcattaccccccatctcaacaaggttaaatcccggagtttt
aagaactttgatgagaactgtgactttttgatggatgctgagagtgatcttgatgagcct
gcacaaattgaaccagaacctgaggatatggcatatgatctttgtcccaaaaggtctggg
atctcatggatggattatggactcaaggaattttgccttgttctaagtggaaaaattggg
gtggataggaggactgtgaatctagaggcaaagatcaagatcagtatggaatatcctgtg
aggcctcctctttttgcattgacaatttgccttgtatcttctggaaataaacatcaagag
aatgatgatttggactggtacaatgaacttcgtgctatggaagctgaggtcaatcttcac
atgctaaaggtgctacctgcggatcaacaaaatcatgtcttggcgcatcaagtgcgttgt
cttgctatgttgttcaactgttacttagacgaggcttcccaatcatctgaagggagaagt
tgtacctctgttgttgacgttggtctatgcaaaccagtaaacggtaggttcctgaataga
tcttttagaggaagggatcgaaggaagattgtctcctggaagaacttggaattcatcccc
aactaa
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