Prosopis cineraria: 129304424
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Entry
129304424 CDS
T09047
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129304424
03036 Chromosome and associated proteins [BR:
pcin03036
]
129304424
Transcription factors [BR:
pcin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
129304424
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
129304424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
CHDNT
Motif
Other DBs
NCBI-GeneID:
129304424
NCBI-ProteinID:
XP_054800044
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MTDGHLFNNIALGGRGGTNPGQMKIYSGGILWKRQGGGKAIEVDKADIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVASLTSFFQNTCGITPEEKQLSVSGRNWGEVDLNGNMLT
FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVQSTLSMG
EDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGGVQATDGVAAVLQEDDDDAVDPHLERIKNAAGGDESDE
EDEDFVADEDDSGSPTDDSGEDESDASEGGGKEKPAKKESKKELSSKASTSKKKPKDGDE
DGKKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKSNPGISFTDVGRVLGEKWKKKIRY
ADEKEPYEAKARADKKRYKDEISGYKNPQPMNVDSGNESDST
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacggatggtcatctctttaacaacatcgctctcggtggccgtggaggaactaatcca
gggcagatgaaaatatattctggagggattttatggaaaagacagggtggcggtaaagca
attgaggttgataaagctgacataatgggagtgacttggatgaaggtcccaagaactaat
cagcttggtgttcgaatcaaagatggattgttctacaagttcactgggttccgtgaccag
gatgtggcaagtttgactagctttttccaaaatacatgtgggattacaccagaggaaaag
cagctttctgttagtgggcgtaactggggagaagttgatctaaatggaaatatgctgact
ttcatggttggctcaaagcaagcttttgaggtatctttagcagatgtctctcaaacacag
cttcaagggaaaaatgatgtgatcttggagtttcatgtggatgacacgactggggctaat
gagaaagattctttgatggagataagttttcacataccaaattccaacacccaatttgtt
ggtgatgaaaatcgtcctcctgctcaggttttccgtgataaaatcatgtctatggcggac
gtcggtgctggaggtgaagatgctgttgttacgtttgagggtattgctattctaacacca
agggggcggtacagtgttgaactacatctgtcattcttgcggcttcaaggacaagctaat
gatttcaaaatccagtatagcagtgttgttcgcctatttttacttcccaagtcaaatcag
ccacacacctttgttgttattagtcttgatccgccaattcgtaaaggacaaactttgtac
ccacacattgtgatgcagtttgaaactgattacgtagttcaaagcacgttgtcaatgggt
gaagatctttacaacagtaagtacaaggacaagttggagctttcatataaggggctcatc
catgaagttttcacaacaatattgcgtggtttgtctggtgccaaagttaccaagccagga
aaattcaggagctgtcaagatggttatgctgtgaaatcgtctttgaaagctgaagatgga
attttgtatccccttgagaagagcttcttctttttacctaaacctcctaccctcattctt
catgaagagattgactatgtggaatttgagaggcatactgctgggggttcaaatatgcat
tattttgaccttcttatcagactaaaaactgagcaggagcatctattccgtaatattcag
agaaatgaataccacaatctttttgactttatcagttcaaaaggcttgaaaattatgaac
cttggaggtgtccaagctactgatggtgtcgccgctgttcttcaagaagatgatgatgat
gctgttgatccacatcttgagcgcataaaaaatgcagctggtggagatgagagtgatgaa
gaggatgaggattttgttgccgatgaggatgatagtggttctccgactgatgattctgga
gaagacgagtctgatgcaagtgaaggtggtgggaaagagaagcccgccaaaaaggaatca
aagaaggaactgtcttctaaggcatctacttcaaagaagaaacctaaagatggagacgaa
gatgggaaaaagaaaaaacagaagaagaaaaaggatcctaatgcgccaaagagggcattg
tctggtttcatgttcttctcccaaatggagagagagaatctgaagaaaagtaatcctgga
atttcatttacggatgtgggaagagtacttggagagaaatggaagaagaagatcaggtac
gcggacgagaaggaaccgtatgaagcaaaagctcgtgcagataaaaaacgttacaaggat
gagatcagtgggtacaagaatccgcaacctatgaacgtagactcaggaaacgaatctgat
agtacttga
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