Prosopis cineraria: 129304513
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Entry
129304513 CDS
T09047
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129304513
09122 Translation
03013 Nucleocytoplasmic transport
129304513
03015 mRNA surveillance pathway
129304513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129304513
03041 Spliceosome [BR:
pcin03041
]
129304513
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129304513
Spliceosome [BR:
pcin03041
]
Common components
Common spliceosomal components
Cap binding complex
129304513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
TPR_MLP1_2
ATG16
T3SSipB
Motif
Other DBs
NCBI-GeneID:
129304513
NCBI-ProteinID:
XP_054800174
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSSWKSLLLRIGDKCPEYGTSEFKDHIETCFGTLRRELEHSESDVLQFLLDCAEQLPHKI
SLYGTVIGLINLEHEDFVRKLVEKTQTDFQDALNCGNCNRVRILMRLMTVMMCSKVLQPS
SLVVVFETLLSSAATTVDEEKGNPSWQPCADFYITCILSCLPWGGAELMEQVPEEIEGVM
FGIEAYLSIRRHNSDAGLSFFDSNNETERSLGDKDFLEDLWDRVKSLSSNGWKVDSVPRP
HLSFEAQLVSGKSHELGPISCPNIPDPPPIPSGIAYGKQRHEAELKYPQRIRRLNIFPPS
KTEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMAGLPVPFRYEYLMAETIFSQLLMLP
QPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSN
FQFIWPWEEWAYVLDLPKWAPQRVFVQEVLDREVRLSYWDKVKQSIENAPGLEELLPPKG
GPNFKYGAEDDKENSEHVLSGELNNMVKGRVPIREIIAWIDENVLPNNGLEVSLRVTIQT
LLNIGSKSFTHLITVLERYGQVIAKVCPDQDKQVMLIAEVSSLWKSNTQMTAIAIDRMMG
YRLVSNLAIVRWVFSPENIEQFHTSDRPWEVLRNAVSKTFNRISDLRKEILSLKKSIAPA
VEAAKEAKAELDAAESKLTLVDGEPVLGENPVRLNRLKSRAEKAKEEVVSLQESLEAKEA
LLARAADENEALFLSLYKGFSNVLMERLPEASAAQTLHELKSMHVDEMAVGPEEKSAMDV
DDENQTHQNSQSNGGRTKNAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHIEKLDAEVL
TEDTHPLFQTAVYSGLRRPINEA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaaaagtcttcttctacgaatcggcgacaagtgccccgaatatgggacc
tccgaattcaaagaccacattgaaacatgttttggcacccttcgacgtgagctagagcac
tctgaaagtgatgtcttgcaattccttcttgattgtgctgagcaactgcctcacaagatc
tctttatatggaacagtgattggcttgattaacctagaacatgaggactttgtaaggaaa
ttagtagagaaaactcaaactgattttcaggatgccttgaattgtggaaactgcaacagg
gtacgcattttaatgcggcttatgactgtcatgatgtgcagtaaggttcttcaaccaagt
tctttggtagttgtctttgaaacattgttatcatcagctgccacaacagtcgatgaggaa
aaagggaatccctcctggcaaccatgtgctgacttttacataacttgcattttatcatgt
cttccatggggtggagcagaacttatggagcaagttcctgaagagattgagggagtaatg
tttggcatagaagcttatttgagcatcagaaggcacaattctgacgctggtttatccttt
tttgacagtaataacgaaactgagagaagtcttggggacaaggacttcttggaagattta
tgggatagagtcaaatctttatccagcaatggatggaaagttgacagtgttccaaggcct
catctttcatttgaagctcagctagtttccgggaagtcccatgaattgggaccgataagc
tgcccaaacataccagacccacctccaatcccttctggcatagcttatggtaaacaaagg
catgaggcagaattaaaatatcctcaaagaatacgccggcttaacatatttcctcctagt
aaaactgaggatctacagcctatagatcgatttgttatggaagagtatctcctagatgtg
cttctgttcttcaatggatgtcgaaaggaatgtgcttctttcatggctggcctgccagtg
cccttcagatatgagtaccttatggcagagacaattttctctcagttgctgatgttaccc
cagccccctttcaagcccatatattacacactggttattattgacttatgtaaggctctt
cctggagctttccctgcagttgtagcaggagcagttcgtgctctgtttgagaagattgct
gatttggatatggagtgtcggatccgtctcattctttggttctcacaccatttatcaaac
tttcagttcatatggccatgggaagagtgggcttacgtcctagacctcccaaagtgggcc
ccacaacgtgtatttgttcaggaagttttggatagagaagttaggttgtcttattgggac
aaagttaagcagagcattgagaatgcacctggtctagaagagttgcttcctccaaagggt
ggaccaaacttcaaatatggtgcagaagatgataaagaaaactctgagcatgtgctttct
ggagaactcaacaacatggttaaaggaagggtgcctatccgtgaaataattgcatggatt
gatgaaaatgtgctccccaataatggtctagaagttagcctcagagtgacgatacaaact
cttctaaatattggttctaagagcttcactcatttaataacagtcttagagagatacgga
caagtcattgcaaaagtttgtcctgatcaggataagcaagtcatgttgattgctgaagtg
agttctctctggaagagcaatactcaaatgactgctatagcaattgacaggatgatgggt
tatagacttgtatccaatttagccattgtcagatgggttttctctccagaaaatattgag
caattccatacctcagatcgtccatgggaggttcttagaaatgcagtaagcaagacattt
aatcgtatttctgatctaaggaaagagatattatctcttaaaaagagtattgccccagcc
gtagaagctgccaaggaggcaaaagcagagttagatgctgcggagtcaaagcttacactg
gtagatggtgaaccagttctcggggaaaatcctgtgcgattgaaccgattgaaatcacga
gctgagaaagcaaaggaggaagtggtgtcccttcaggaatctttagaagctaaggaagct
cttcttgcacgggcagctgatgaaaatgaggcattgtttctctcattgtacaaaggcttt
tcgaatgtgttaatggagcgtcttccagaagcatctgcagcccaaacacttcatgaattg
aagtctatgcatgttgatgagatggctgttggccctgaagagaaatcagcaatggacgtg
gacgatgaaaatcagacacatcaaaacagtcagtcgaatggtgggaggacaaagaatgct
tataatgttggtgaaaaagagcagtggtgtatcaccactttgggatatgtcaaggccttc
tctaggcagtacgctgctgagatatggccccatattgaaaagttggatgctgaggtattg
acagaagatacacatcctctttttcagacggctgtgtattctggtcttcgaagaccaatt
aacgaggcttga
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