Prosopis cineraria: 129304903
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Entry
129304903 CDS
T09047
Name
(RefSeq) pre-mRNA-splicing factor 38 isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129304903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129304903
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129304903
Complex C
U4/U6.U5 tri-SnRNP related factors
129304903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
129304903
NCBI-ProteinID:
XP_054800719
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELEYLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL
EPLYNDYRKLRRKLPDGQFSLTHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGALELR
RSALEEDFEEEEEKEENEQPVDGLEDGSYEKQDYYRGRSPTRERDRDRRRDSHRHRDRDY
ERDYDRERGRGRDRDRDRERDRDRDRDRDRDRYRLREEKEYGREREGRERDRRDRDRDRE
RGRRRSHSRSRSRSRDRKDRKRHGRSSTSPSSRRHGDGGHEEAEPRKKKEKKDDGTDHPD
PEIAEANKLRAALGLKPLRP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcactgatccagcagcgaaaagtatcagaggcacaaatcctcagaatttg
gtggagaagattctccgatcaaagatctaccagaacacttattggaaggaacaatgtttt
ggtttgacagcggagaccttggtggacaaagccatggaactcgaatatcttggtggaact
tatgggggtaaccgcaaacccacacccttcatgtgccttgtcatgaagatgttgcagatt
caacctgagaaggaaattgtcatcgagtttatcaagaatgaggattacaaatatgtgaga
atactcggtgctttttacctgcgccttactggatctgatattgatgtgtatcgatatttg
gagcccctatacaatgactaccggaaactgaggcgaaaattacctgatggccagtttagt
ttgacacatgtggatgaggttattgatgagctcttgacaaaagattactcctgtgatatt
gccttgccccgaattaagaaaaggtggactcttgaatctagtggtgccctagaacttcga
cgtagcgcacttgaagaagattttgaggaggaagaagagaaagaagaaaatgagcagcct
gttgatgggctagaagatggatcctatgagaagcaggattattatcgaggacgaagcccc
acaagggaaagagatagagatagaagacgtgatagtcataggcacagggatcgagattat
gaacgagattacgatagggagagagggcgagggcgtgatagagacagggatagagagagg
gacagggaccgagacagagacagagatcgagatcgatatcgtctgagggaagagaaagag
tatggaagagaaagagaggggagggagcgagataggagagacagagatagggaccgggag
agagggagacgaagaagccactcaaggagcagaagtaggagcagagatcgcaaggatagg
aagagacatggacggagcagcacgagtccaagcagcagaaggcatggagatggtggacat
gaggaagcagagcccaggaagaagaaggagaagaaggacgatgggacggatcaccctgat
ccggagattgctgaggccaacaagttacgagctgctctgggcttgaaacccctcagaccc
tga
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integrated database retrieval system
