Prosopis cineraria: 129305503
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Entry
129305503 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pcin
Prosopis cineraria
Pathway
pcin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129305503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129305503
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129305503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129305503
NCBI-ProteinID:
XP_054801489
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSLISQNVDLKNEVKKTKRGETSELTYLEEVEGVKESEIDMLKMKKRKKESKEEQLQREQ
VKEMKSLENFLFGSLYSPIEFGKGDDSLQDGIAKGSDSFFTDRSANSVLSAYEDADYLEE
SDDDRDASQRKPAWVDEEEESTAVNIAKVNRLRKLRKEEGESLITGSEYVSRLRAQHVKL
NPGTDWAQLDSRSKIDKSSDDESTDEENEVVVSRGYRDIDDILRTNEDLVVKSRSKLMPG
HLDYSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDGKRNTKIQSIFLE
DCPIRKASFLPDGSQVIVSGRRKXFYSFDLVKAKVDKIGPLVGREEKSLEAFEVSLDSRM
IAFVGNEGYILLVSTKTKELVGTLKMNGTVRALAFAEDGQQLLSTGGDGHIYHWDLRTMT
CIHKGIDEGCINGTALCTSPGGELFAASGSDGGIVNIYNREEFLGGRRKPLKAIGNLITK
VDFMKFNNDSQILAICSSMKNSSVKLIHIPSYTVFSNWPPPNKNLHYPRSIDFSPGGGFM
AVGNAAGRVLLYKLHHYQHA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatatctcaaaatgttgaccttaaaaatgaggtcaagaagaccaaaagaggg
gagaccagtgaacttacatatctggaagaggtggaaggtgtgaaagaatctgagattgat
atgttgaaaatgaaaaagaggaagaaagagagcaaggaggagcagttgcaaagggaacaa
gtgaaggaaatgaaatcgctagaaaattttttgtttggatctctctactcccctattgaa
tttggaaagggagacgatagtctgcaagatgggattgcaaagggttctgattcattcttc
actgaccgttctgcaaatagtgtgctatcggcttatgaagatgcagattatttggaggaa
agtgatgatgatagggatgcttcacaaagaaaaccagcttgggtagatgaagaagaggaa
tcaactgctgtaaacatagccaaagttaatagattaagaaagctgagaaaggaagagggt
gaaagcttgattactggttcagagtatgtgtcaagattgagggcacagcatgtaaaactc
aaccctggaaccgactgggcacagcttgattcaaggtcaaaaatagataaatcttctgat
gatgaatcaacagatgaagaaaatgaggttgttgtgagccgtggttacagggatattgat
gatattcttagaacaaatgaagacctggttgtgaagagccggtcaaagttgatgccagga
catttggattactcaagactcgtggatgcaaatatacaagatccttctaatggtcccata
aattcggtccagttccatagaaatgcccagctgcttcttgctgcaggactagatcggagg
cttagattttttcaaattgatggcaagcgcaacactaaaattcaaagcatcttccttgag
gattgccctattcgaaaagcatccttcttgcctgatggatctcaggttatagtatctggt
agacgaaagnttttttatagttttgatttagtcaaggctaaagttgataaaataggccct
ctggttggtagggaggaaaagagcttggaagcttttgaggtgtccctcgattctcgcatg
atagcgtttgtgggtaatgaaggctatattttgttggtttcaactaagacgaaggaatta
gttggtacactaaagatgaatgggacagtccgcgccttagcttttgctgaagacggacag
cagctgctgagcactggtggtgatggccacatctaccactgggatcttagaacaatgact
tgcatacacaagggaattgatgaaggttgcataaatggtacagctctttgcacatcgcct
gggggggaactttttgcagctagtggttcagatggggggattgtgaacatttacaataga
gaagaattccttgggggcaggagaaagcccctgaaggctattggcaatttgattaccaaa
gtggatttcatgaaattcaataatgattctcaaatacttgcaatctgttcgagtatgaag
aatagcagtgtaaagttgatacacatcccatcttacacagtattctccaactggccgcca
ccaaataagaacctacactatccccgtagtattgatttcagtcctggtggtggttttatg
gccgtgggaaatgctgcaggaagagttttgttatacaagctgcatcactaccagcatgcc
tga
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